Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.2□□□□□ -2.38
HMGN4O00479 AL356057.1-201ENST00000533798 831 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 AC016957.1-201ENST00000534895 309 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.2□□□□□ -2.38
HMGN4O00479 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.2□□□□□ -2.38
HMGN4O00479 AC091946.2-201ENST00000606105 291 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
HMGN4O00479 AC107905.1-201ENST00000616204 426 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 AC120349.3-201ENST00000624377 529 ntBASIC0.2□□□□□ -2.38
HMGN4O00479 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
HMGN4O00479 RNU6-348P-201ENST00000384386 107 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 RNU6-1300P-201ENST00000391046 108 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 AL356776.1-201ENST00000406574 447 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 FTH1P15-201ENST00000406984 280 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 AC138623.1-201ENST00000418060 216 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.19□□□□□ -2.38
HMGN4O00479 MTCO3P1-205ENST00000422088 832 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.19□□□□□ -2.38
HMGN4O00479 AC002429.1-201ENST00000437672 148 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.19□□□□□ -2.38
HMGN4O00479 RPS27AP8-201ENST00000452665 445 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 AC026410.2-201ENST00000460281 156 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 AC098869.1-201ENST00000481627 292 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 RNU5A-4P-201ENST00000516588 111 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.19□□□□□ -2.38
HMGN4O00479 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.19□□□□□ -2.38
HMGN4O00479 AC091489.2-201ENST00000566263 604 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 AL078603.1-201ENST00000603824 313 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 AC107304.1-201ENST00000604229 296 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 AC112191.3-201ENST00000604371 277 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 AC090578.1-201ENST00000604955 591 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 AC019226.1-201ENST00000625666 515 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.19□□□□□ -2.38
HMGN4O00479 MIR1248-201ENST00000629190 106 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 U6.99-201ENST00000637524 83 ntBASIC0.19□□□□□ -2.38
HMGN4O00479 RNU4-12P-201ENST00000365233 139 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 RNU6-1005P-201ENST00000384519 107 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 RNU6-754P-201ENST00000391166 107 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 RNU1-139P-201ENST00000391307 165 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 MTCO2P31-201ENST00000402702 684 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 AL133264.1-201ENST00000407157 562 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.18□□□□□ -2.38
HMGN4O00479 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.18□□□□□ -2.38
HMGN4O00479 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.18□□□□□ -2.38
HMGN4O00479 OFD1P3Y-201ENST00000453312 783 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 RNU1-131P-201ENST00000458943 161 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 RNA5SP436-201ENST00000516020 115 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 RNU6-165P-201ENST00000517170 99 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.18□□□□□ -2.38
HMGN4O00479 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.18□□□□□ -2.38
HMGN4O00479 AP001893.2-201ENST00000526949 202 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 AL121579.1-201ENST00000555129 305 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 AC093788.1-201ENST00000609356 927 ntBASIC0.18□□□□□ -2.38
HMGN4O00479 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.18□□□□□ -2.38
HMGN4O00479 RNU4-79P-201ENST00000362764 141 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 RNU6-839P-201ENST00000363347 108 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 RNU6-945P-201ENST00000383947 107 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.17□□□□□ -2.38
HMGN4O00479 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.17□□□□□ -2.38
HMGN4O00479 RAD1P2-201ENST00000446414 663 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 AC020550.1-201ENST00000447385 163 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.17□□□□□ -2.38
HMGN4O00479 AC097473.1-201ENST00000508142 408 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 AC118282.2-201ENST00000508739 374 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 RNA5SP134-201ENST00000516492 96 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 RNA5SP481-201ENST00000516814 122 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 AL590705.4-201ENST00000532209 134 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 AC093012.1-202ENST00000549403 582 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 BNIP3P31-201ENST00000604515 566 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 AL353765.1-201ENST00000605514 183 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.17□□□□□ -2.38
HMGN4O00479 TUG1_2.1-201ENST00000614234 87 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 AC123767.1-202ENST00000620407 817 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 MIR6516-201ENST00000630554 81 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 MTND4P14-201ENST00000435799 1354 ntBASIC0.17□□□□□ -2.38
HMGN4O00479 Y_RNA.354-201ENST00000365448 111 ntBASIC0.16□□□□□ -2.38
HMGN4O00479 RNU6-910P-201ENST00000390844 107 ntBASIC0.16□□□□□ -2.38
HMGN4O00479 GTF2IP3-201ENST00000433887 494 ntBASIC0.16□□□□□ -2.38
HMGN4O00479 AC002542.1-201ENST00000440683 193 ntBASIC0.16□□□□□ -2.38
HMGN4O00479 BRK1P2-201ENST00000442875 223 ntBASIC0.16□□□□□ -2.38
HMGN4O00479 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.16□□□□□ -2.38
HMGN4O00479 AC010631.1-201ENST00000474150 156 ntBASIC0.16□□□□□ -2.38
HMGN4O00479 SNORA31.4-201ENST00000516049 129 ntBASIC0.16□□□□□ -2.38
HMGN4O00479 RNA5SP220-201ENST00000516298 104 ntBASIC0.16□□□□□ -2.38
HMGN4O00479 RNA5SP255-201ENST00000516370 107 ntBASIC0.16□□□□□ -2.38
HMGN4O00479 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.16□□□□□ -2.38
HMGN4O00479 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.16□□□□□ -2.38
HMGN4O00479 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.16□□□□□ -2.38
HMGN4O00479 MIR4782-201ENST00000577987 79 ntBASIC0.16□□□□□ -2.38
HMGN4O00479 AC068790.6-201ENST00000602558 258 ntBASIC0.16□□□□□ -2.38
HMGN4O00479 AC006270.3-201ENST00000605967 1036 ntBASIC0.16□□□□□ -2.38
HMGN4O00479 AL158163.2-201ENST00000619110 700 ntBASIC0.16□□□□□ -2.38
HMGN4O00479 LINC02555-201ENST00000563933 1951 ntBASIC0.15□□□□□ -2.38
HMGN4O00479 AL589743.1-201ENST00000551932 2712 ntBASIC0.15□□□□□ -2.38
HMGN4O00479 AC023934.1-201ENST00000574529 2389 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 RNU6-655P-201ENST00000362858 107 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 RNU6-188P-201ENST00000364207 107 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 RNU6-898P-201ENST00000365627 104 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms