Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AP001025.1-201ENST00000486139 332 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
UPK1AO00322 AC117522.1-201ENST00000509821 380 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.37□□□□□ -2.19
UPK1AO00322 PTP4A1P4-201ENST00000512479 322 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.37□□□□□ -2.19
UPK1AO00322 Y_RNA.675-201ENST00000516389 149 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 RNU6-965P-201ENST00000516721 96 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 RN7SKP256-201ENST00000517201 314 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.37□□□□□ -2.19
UPK1AO00322 AC022616.8-201ENST00000533569 253 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 AC091489.2-201ENST00000566263 604 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 MIR4285-201ENST00000581001 85 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 CLIC4P2-201ENST00000601934 717 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 AL645939.4-201ENST00000604495 135 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 AL359314.1-201ENST00000616913 261 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 AC099842.1-201ENST00000619919 596 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 U1.36-201ENST00000620684 176 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 SNORD56.1-201ENST00000362913 68 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 RNU5F-6P-201ENST00000362979 116 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 RNU1-17P-201ENST00000363022 152 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 RNU6-743P-201ENST00000364151 106 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
UPK1AO00322 AC068050.1-201ENST00000394891 380 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 MIR1262-201ENST00000408276 93 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 RNU2-39P-201ENST00000410604 198 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 AC114491.1-201ENST00000416095 246 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 C1DP2-201ENST00000418167 426 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 AC098592.1-201ENST00000419352 333 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 AC007098.1-201ENST00000420122 367 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 AL590556.1-201ENST00000423231 483 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.36□□□□□ -2.19
UPK1AO00322 HMGB1P31-201ENST00000437242 427 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 RPS24P1-201ENST00000438550 371 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.36□□□□□ -2.19
UPK1AO00322 MTND5P2-201ENST00000442927 1142 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.36□□□□□ -2.19
UPK1AO00322 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.36□□□□□ -2.19
UPK1AO00322 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.36□□□□□ -2.19
UPK1AO00322 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.36□□□□□ -2.19
UPK1AO00322 AC117532.1-201ENST00000514638 323 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 ELOCP32-201ENST00000548625 324 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.36□□□□□ -2.19
UPK1AO00322 AC015720.1-201ENST00000565251 277 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 MIR4713-201ENST00000582691 75 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.36□□□□□ -2.19
UPK1AO00322 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.36□□□□□ -2.19
UPK1AO00322 CYP2C61P-201ENST00000604072 290 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 SEPT7P9-203ENST00000604116 343 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 AC026585.1-201ENST00000619582 524 ntBASIC1.36□□□□□ -2.19
UPK1AO00322 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
UPK1AO00322 snoU2_19.1-201ENST00000362361 80 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.35□□□□□ -2.19
UPK1AO00322 AL033519.2-201ENST00000403958 392 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 MIR1283-2-201ENST00000408621 87 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 RNU2-48P-201ENST00000410694 191 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.35□□□□□ -2.19
UPK1AO00322 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
UPK1AO00322 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.35□□□□□ -2.19
UPK1AO00322 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.35□□□□□ -2.19
UPK1AO00322 AC007283.2-201ENST00000424739 197 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 USP9YP18-201ENST00000425912 695 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 AL365184.2-201ENST00000431139 435 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 HMGB1P18-201ENST00000438801 619 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 FDX1P2-201ENST00000450769 375 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 RPS29P29-201ENST00000456396 171 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 RPL30P12-201ENST00000474666 353 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 SNORA43.2-201ENST00000516652 128 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.35□□□□□ -2.19
UPK1AO00322 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.35□□□□□ -2.19
UPK1AO00322 AP003181.2-201ENST00000528941 181 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 TMF1P1-201ENST00000576058 373 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 MIR5692A1-201ENST00000580523 69 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 AL031775.1-201ENST00000607014 887 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 AL022345.1-201ENST00000607292 135 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.35□□□□□ -2.19
UPK1AO00322 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 AL157786.1-207ENST00000627771 695 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.35□□□□□ -2.19
UPK1AO00322 OR4G3P-201ENST00000633500 913 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 AC006927.3-201ENST00000638789 384 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.35□□□□□ -2.19
UPK1AO00322 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
UPK1AO00322 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UPK1AO00322 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.19
UPK1AO00322 MIR126-201ENST00000362291 85 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 Y_RNA.40-201ENST00000362645 93 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 RNU6-944P-201ENST00000364023 107 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 RNY1P12-201ENST00000364251 105 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 RNU6-39P-201ENST00000384344 107 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 MIR578-201ENST00000384828 96 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
UPK1AO00322 RNA5SP213-201ENST00000391031 106 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 RAP1BP3-201ENST00000407180 549 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 RN7SKP51-201ENST00000410781 304 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 SRIP3-201ENST00000413200 219 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.34□□□□□ -2.19
UPK1AO00322 MED13P1-201ENST00000428342 171 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms