Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CCDC188H7C350 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC188H7C350 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
CCDC188H7C350 AL354685.2-201ENST00000448218 1447 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC188H7C350 U3.13-201ENST00000364804 214 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 RNA5SP126-201ENST00000365092 109 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 MIR186-201ENST00000384988 86 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 AL353193.1-201ENST00000421444 268 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC188H7C350 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC188H7C350 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC188H7C350 AL139109.1-201ENST00000455491 297 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 SRRM1P2-201ENST00000464531 1192 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 AF213884.2-201ENST00000510417 903 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 AC026436.1-201ENST00000510537 270 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC188H7C350 RNU6-377P-201ENST00000515965 102 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 RN7SKP132-201ENST00000516001 208 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 SNORA31.23-201ENST00000517219 133 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC188H7C350 AP005902.1-201ENST00000521358 186 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 AP005435.4-201ENST00000529514 284 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC188H7C350 AC090897.2-201ENST00000581715 130 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 MIR3945-201ENST00000581853 98 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 AL121917.1-203ENST00000605534 577 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 AC080013.6-201ENST00000606185 215 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 AC002044.1-201ENST00000606707 158 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CCDC188H7C350 Z69720.2-201ENST00000624755 279 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 AP003400.5-201ENST00000624827 617 ntBASIC2.43□□□□□ -2.02
CCDC188H7C350 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC188H7C350 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC188H7C350 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC188H7C350 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
CCDC188H7C350 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC188H7C350 RNU6-1010P-201ENST00000362757 107 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 RNU6-655P-201ENST00000362858 107 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 RNU6-266P-201ENST00000364225 107 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 Y_RNA.255-201ENST00000364581 97 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CCDC188H7C350 RNU6-1158P-201ENST00000391167 107 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 AC016907.1-201ENST00000419483 435 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 AC003685.2-201ENST00000422795 395 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 AC010975.2-201ENST00000427781 588 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 ARL5AP4-201ENST00000430731 512 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 AL121601.2-201ENST00000438019 707 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 AC073415.1-201ENST00000449240 153 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC188H7C350 SNRPGP7-201ENST00000469016 106 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC188H7C350 RPL37P25-201ENST00000507308 276 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 RNA5SP401-201ENST00000515920 127 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.42□□□□□ -2.02
CCDC188H7C350 AC093249.1-201ENST00000567049 203 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC188H7C350 AC107304.1-201ENST00000604229 296 ntBASIC2.42□□□□□ -2.02
CCDC188H7C350 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CCDC188H7C350 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC188H7C350 RNU6-1085P-201ENST00000363576 107 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 Y_RNA.194-201ENST00000363985 102 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 RNU6-1322P-201ENST00000364309 107 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 Y_RNA.436-201ENST00000384097 102 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 RNU6-1032P-201ENST00000384100 107 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 RNU2-52P-201ENST00000410680 190 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC188H7C350 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC188H7C350 MORF4L1P6-201ENST00000418771 268 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC188H7C350 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC188H7C350 AL161788.1-201ENST00000441805 169 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC188H7C350 AL122001.1-201ENST00000457027 370 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 RPL7P43-201ENST00000478876 753 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC188H7C350 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC188H7C350 AC010486.1-201ENST00000511793 424 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 RNA5SP356-201ENST00000515972 94 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 AP003034.1-201ENST00000534621 422 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 AC023050.3-201ENST00000541142 333 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 AC245505.1-201ENST00000556398 224 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 GTF3AP2-201ENST00000557014 266 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 AC103810.6-201ENST00000606708 136 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 MIR6766-201ENST00000622641 72 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 AL160394.1-201ENST00000624765 724 ntBASIC2.41□□□□□ -2.02
CCDC188H7C350 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC188H7C350 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC188H7C350 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CCDC188H7C350 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC188H7C350 AL139276.1-201ENST00000311910 1001 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 RNU6-622P-201ENST00000384272 103 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 Y_RNA.481-201ENST00000384373 102 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 MIR524-201ENST00000385242 87 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 RNA5SP219-201ENST00000390940 113 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 RNA5SP390-201ENST00000410191 113 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 RNU2-23P-201ENST00000410545 195 ntBASIC2.4□□□□□ -2.03
CCDC188H7C350 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms