Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC187A0A096LP49 MAPK10-322ENST00000641485 4530 ntBASIC3.21□□□□□ -1.89
CCDC187A0A096LP49 KPNA2P1-201ENST00000458289 1591 ntBASIC3.21□□□□□ -1.89
CCDC187A0A096LP49 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 RNA5SP42-201ENST00000364278 115 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 MIR184-201ENST00000384962 84 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 Y_RNA.645-201ENST00000391229 102 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 RPS15AP6-201ENST00000420703 385 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 COTL1P1-201ENST00000422309 375 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 AL031183.1-201ENST00000457667 207 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 AC104472.2-201ENST00000469035 601 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 AC109925.1-201ENST00000478069 331 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 AC026782.1-201ENST00000512952 449 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 SNORA25.10-201ENST00000515926 124 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 RNU6-1183P-201ENST00000517054 60 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 AC026371.1-201ENST00000551867 419 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 EIF4BP1-201ENST00000554881 351 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 MYL12BP1-201ENST00000569826 507 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 AL162713.1-201ENST00000604480 262 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 AL365434.2-201ENST00000607979 234 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 MIR6852-201ENST00000621699 66 ntBASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
CCDC187A0A096LP49 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 MTND5P7-201ENST00000413558 1798 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 Y_RNA.80-201ENST00000362996 102 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 Y_RNA.176-201ENST00000363815 109 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 RNU6-601P-201ENST00000384540 107 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 RNU6-658P-201ENST00000384606 106 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AL096701.2-201ENST00000416920 238 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 PGBD4P6-201ENST00000421501 610 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 snoU13.28-201ENST00000459235 104 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 CYCSP39-201ENST00000565821 309 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AC010653.1-201ENST00000571108 881 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AC113195.1-201ENST00000579952 141 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AC104695.3-201ENST00000604052 296 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 AL365361.1-201ENST00000566942 3481 ntBASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC187A0A096LP49 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 MIR422A-201ENST00000362286 90 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 RNA5SP197-201ENST00000363357 119 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 Y_RNA.364-201ENST00000365532 101 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 RNU6-890P-201ENST00000384121 107 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 RNU4-70P-201ENST00000384579 139 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 RPL7P37-201ENST00000425095 738 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC002075.2-201ENST00000425207 252 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 UBE2V1P4-201ENST00000425374 344 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC093151.1-201ENST00000427711 313 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 RPL21P40-201ENST00000428586 483 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 RPL26P9-201ENST00000457466 433 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC128713.1-201ENST00000471495 306 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC107222.1-201ENST00000510899 637 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC009812.2-201ENST00000517657 457 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AP005902.1-201ENST00000521358 186 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC093331.1-201ENST00000521474 169 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 LINC00933-203ENST00000559812 219 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AP000787.2-201ENST00000604432 568 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms