Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SNORA31.19-201ENST00000517079 126 ntBASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 CASP1P1-201ENST00000526345 212 ntBASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 MED28P6-201ENST00000558776 231 ntBASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 AC060766.3-201ENST00000591442 263 ntBASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 AC090132.2-201ENST00000615881 347 ntBASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 SCARNA4-202ENST00000625402 129 ntBASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 AP000553.6-201ENST00000641242 118 ntBASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HCFC2Q9Y5Z7 AC007785.2-201ENST00000598627 1916 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 RNU5E-7P-201ENST00000365290 117 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 RNU6-378P-201ENST00000384324 107 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 AL591043.1-201ENST00000432461 424 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 PIGFP3-201ENST00000441918 722 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 AC092798.1-201ENST00000458542 409 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 RPL23AP94-201ENST00000512518 302 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 RNA5SP291-201ENST00000517222 105 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 AC090877.1-201ENST00000561418 344 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 MTND6P33-201ENST00000571794 183 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 AC090617.3-201ENST00000573670 475 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 AP002826.1-201ENST00000608835 315 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 MIR7851-201ENST00000610611 160 ntBASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HCFC2Q9Y5Z7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 RNU6-1266P-201ENST00000362794 105 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 RNU6-428P-201ENST00000362942 107 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 Y_RNA.150-201ENST00000363562 102 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 RNU4-9P-201ENST00000364951 139 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 MIR128-1-201ENST00000384921 82 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 SNORD78.2-201ENST00000391076 69 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 PCNPP3-201ENST00000393579 471 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 AC098614.2-201ENST00000426040 255 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 AC005300.1-201ENST00000428401 373 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 AL590383.1-201ENST00000428602 75 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 ANP32BP2-201ENST00000454525 545 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 VWA8P1-201ENST00000510889 176 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 RNU2-27P-201ENST00000516185 142 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 AC008011.1-201ENST00000545989 227 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 AL133383.2-201ENST00000622958 2336 ntBASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HCFC2Q9Y5Z7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HCFC2Q9Y5Z7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
HCFC2Q9Y5Z7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
HCFC2Q9Y5Z7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
HCFC2Q9Y5Z7 AL136964.1-201ENST00000622038 2990 ntBASIC3.84□□□□□ -1.8
HCFC2Q9Y5Z7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 Y_RNA.65-201ENST00000362846 100 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 RNU6-336P-201ENST00000364891 107 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 SNORD63-201ENST00000384262 68 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 MIR1298-201ENST00000408783 112 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 RNA5SP239-201ENST00000410218 129 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 DBIP2-201ENST00000419076 262 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 RPS12P23-201ENST00000419579 400 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 AP006245.1-201ENST00000522549 120 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 HMGB1P14-201ENST00000557424 591 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 U2.14-201ENST00000615943 113 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 AC240442.1-201ENST00000616055 283 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms