Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SNX11Q9Y5W9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.01□□□□□ -1.77
SNX11Q9Y5W9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SNX11Q9Y5W9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.01□□□□□ -1.77
SNX11Q9Y5W9 MAPK10-253ENST00000641010 4072 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4□□□□□ -1.77
SNX11Q9Y5W9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4□□□□□ -1.77
SNX11Q9Y5W9 RNU6-961P-201ENST00000363893 105 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 RNU6-1175P-201ENST00000365200 107 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 RNU6-1130P-201ENST00000365434 107 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 RNU6-22P-201ENST00000384355 107 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 MIR30B-201ENST00000384850 88 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 RNU1-139P-201ENST00000391307 165 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 RNU6-735P-201ENST00000410612 107 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4□□□□□ -1.77
SNX11Q9Y5W9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4□□□□□ -1.77
SNX11Q9Y5W9 AL031659.1-201ENST00000447075 539 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 PTMAP3-201ENST00000447474 330 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4□□□□□ -1.77
SNX11Q9Y5W9 AP004371.1-201ENST00000525240 214 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX11Q9Y5W9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4□□□□□ -1.77
SNX11Q9Y5W9 SNORA51-201ENST00000606420 132 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 AC073349.3-201ENST00000617616 186 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4□□□□□ -1.77
SNX11Q9Y5W9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNX11Q9Y5W9 AC093535.2-201ENST00000624769 2326 ntBASIC4□□□□□ -1.77
SNX11Q9Y5W9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
SNX11Q9Y5W9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
SNX11Q9Y5W9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SNX11Q9Y5W9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4□□□□□ -1.77
SNX11Q9Y5W9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SNX11Q9Y5W9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 AC004925.1-201ENST00000624256 2706 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 UBE2WP1-201ENST00000362030 340 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 SNORA63.1-201ENST00000362493 131 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 SNORD115-32-201ENST00000364079 82 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 Y_RNA.331-201ENST00000365267 102 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 SNORD116-18-201ENST00000383961 92 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 Y_RNA.570-201ENST00000384750 101 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 MIR487A-201ENST00000385009 80 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 HLFP1-201ENST00000402375 499 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 RNU6-1001P-201ENST00000411265 100 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 AC093578.1-201ENST00000415219 368 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 AC098614.2-201ENST00000426040 255 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 POLR2KP2-201ENST00000438155 177 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 AC096638.1-201ENST00000444678 216 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 IFNWP4-201ENST00000453148 294 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 AC010285.1-201ENST00000470580 392 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 AC025627.2-201ENST00000576220 160 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 MIR432-201ENST00000606207 94 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 AC090132.2-201ENST00000615881 347 ntBASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX11Q9Y5W9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 SNORA29-201ENST00000384183 140 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 RNU6-281P-201ENST00000384212 103 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 Y_RNA.497-201ENST00000384447 98 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 RNU6-1154P-201ENST00000391001 104 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 RN7SKP156-201ENST00000410308 342 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 SNORA57.3-201ENST00000411095 141 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 RNA5SP39-201ENST00000411245 120 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 BMS1P22-201ENST00000414726 313 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 NDUFB4P7-201ENST00000423198 363 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 AL356867.1-201ENST00000429623 299 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 UQCRBP2-201ENST00000447827 297 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 RPL31P13-201ENST00000484151 370 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 RN7SL323P-201ENST00000494712 295 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 RPL29P14-201ENST00000495837 428 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 UBE2CP3-201ENST00000502715 450 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 RNU6-62P-201ENST00000516526 102 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 SNORA43.2-201ENST00000516652 128 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 RN7SKP49-201ENST00000516675 260 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 AC108706.1-201ENST00000611053 297 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 SCARNA4-202ENST00000625402 129 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 MIR6715B-201ENST00000637172 77 ntBASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX11Q9Y5W9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms