Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 RN7SKP280-201ENST00000364196 304 ntBASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 AC006461.1-201ENST00000412637 326 ntBASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 YPEL5P1-201ENST00000419731 367 ntBASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 AL591419.1-201ENST00000427423 339 ntBASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 AC006517.1-201ENST00000480485 328 ntBASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 AC105129.1-201ENST00000560250 297 ntBASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 AC090877.1-201ENST00000561418 344 ntBASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 BX005214.3-202ENST00000619809 325 ntBASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HRH3Q9Y5N1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 RNU6-801P-201ENST00000364087 105 ntBASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 Y_RNA.542-201ENST00000384641 111 ntBASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 MIR195-201ENST00000385194 87 ntBASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 HMGN2P21-201ENST00000447764 270 ntBASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 HMGN2P10-201ENST00000448085 265 ntBASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 AIG1P1-201ENST00000503376 148 ntBASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 RNU6-1007P-201ENST00000516586 107 ntBASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 RPL23AP53-201ENST00000521854 457 ntBASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 AC011471.1-201ENST00000585766 187 ntBASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 MIR3658-201ENST00000636291 56 ntBASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 AC087190.4-201ENST00000574616 8334 ntBASIC4.41□□□□□ -1.7
HRH3Q9Y5N1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.4□□□□□ -1.7
HRH3Q9Y5N1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
HRH3Q9Y5N1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
HRH3Q9Y5N1 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HRH3Q9Y5N1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HRH3Q9Y5N1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
HRH3Q9Y5N1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.4□□□□□ -1.7
HRH3Q9Y5N1 Y_RNA.24-201ENST00000362508 103 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 Y_RNA.172-201ENST00000363765 102 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 RNU6-622P-201ENST00000384272 103 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 RNA5SP332-201ENST00000391063 115 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 AL355497.1-201ENST00000406262 551 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 RPL35AP21-201ENST00000437667 333 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 AL121914.1-201ENST00000450188 156 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 AC073073.1-201ENST00000493920 463 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 RN7SL558P-201ENST00000497468 299 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 SCARNA22-201ENST00000503991 125 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 AC091868.1-201ENST00000508746 304 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 ACA59.2-201ENST00000517061 156 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 AC021739.1-201ENST00000559631 174 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 AC005520.5-201ENST00000613926 164 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 AL354798.1-201ENST00000622505 329 ntBASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
HRH3Q9Y5N1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 SNORA72.4-201ENST00000384174 132 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 RNU1-82P-201ENST00000390851 165 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 U3.22-201ENST00000391120 215 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 SNORA26.5-201ENST00000391215 123 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 AC079168.2-201ENST00000453977 416 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 AC103975.1-201ENST00000482506 483 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 RPL23AP70-201ENST00000483361 460 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 IGKV1-32-201ENST00000519290 311 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 AC133555.2-201ENST00000550213 292 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 AC022726.1-201ENST00000587475 207 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 AC083809.1-201ENST00000615051 472 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms