Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PTGES3P1-201ENST00000439531 483 ntBASIC0.43□□□□□ -2.34
SHANK2Q9UPX8 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SHANK2Q9UPX8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.43□□□□□ -2.34
SHANK2Q9UPX8 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SHANK2Q9UPX8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.43□□□□□ -2.34
SHANK2Q9UPX8 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.43□□□□□ -2.34
SHANK2Q9UPX8 AC027335.2-201ENST00000624030 375 ntBASIC0.43□□□□□ -2.34
SHANK2Q9UPX8 SNORD95.1-201ENST00000364099 68 ntBASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 RNU2-48P-201ENST00000410694 191 ntBASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 CCDC58P2-201ENST00000417131 366 ntBASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 PPP1R11P2-201ENST00000423543 382 ntBASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 PTGES3P4-201ENST00000426243 356 ntBASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 HSPE1P13-201ENST00000451143 297 ntBASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 RPS27P22-201ENST00000478056 241 ntBASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 NRON-201ENST00000517270 370 ntBASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 AC079416.3-201ENST00000624479 549 ntBASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 SEC63P2-201ENST00000503863 1939 ntBASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.42□□□□□ -2.34
SHANK2Q9UPX8 RNU6-39P-201ENST00000384344 107 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 SNORD14D-201ENST00000384390 87 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 RNU6-700P-201ENST00000391043 107 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 MTCYBP38-201ENST00000417160 1123 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 SNRPEP9-201ENST00000436794 238 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AL353691.1-201ENST00000451332 387 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AC087477.1-201ENST00000465747 340 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AC011005.2-201ENST00000487324 359 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AL160314.1-201ENST00000490836 438 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 PTP4A1P4-201ENST00000512479 322 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AC079598.5-201ENST00000547460 117 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 MIR3937-201ENST00000580135 106 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 VN1R88P-201ENST00000596787 292 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 BX284668.6-201ENST00000606899 438 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 RNU6-878P-201ENST00000384578 110 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 CCNG1P1-201ENST00000406783 885 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 RNA5SP266-201ENST00000410273 108 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 MTCO3P17-201ENST00000443775 513 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AL163195.1-201ENST00000496941 348 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 CLIC4P2-201ENST00000601934 717 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AP001429.1-201ENST00000602568 530 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 RPL21P136-201ENST00000605378 396 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AC004805.2-201ENST00000605382 482 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AC017037.3-201ENST00000625016 472 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AC009950.2-201ENST00000636548 183 ntBASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.41□□□□□ -2.34
SHANK2Q9UPX8 AC138393.1-203ENST00000327086 343 ntBASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 Y_RNA.476-201ENST00000384347 108 ntBASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 RNU6-564P-201ENST00000410983 104 ntBASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 RPS15AP9-201ENST00000439856 381 ntBASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 AC002381.1-201ENST00000447049 280 ntBASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 IGLVI-20-201ENST00000519296 130 ntBASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 MIR4493-201ENST00000584016 73 ntBASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 BNIP3P16-201ENST00000589779 534 ntBASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 AC008751.2-201ENST00000597885 980 ntBASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 VN1R82P-201ENST00000601481 356 ntBASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 MTRNR2L2-201ENST00000604882 87 ntBASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 AP000860.1-201ENST00000605250 559 ntBASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 AC134026.1-201ENST00000623249 2239 ntBASIC0.4□□□□□ -2.35
SHANK2Q9UPX8 RNU6-891P-201ENST00000384280 111 ntBASIC0.39□□□□□ -2.35
SHANK2Q9UPX8 AL133475.1-201ENST00000404414 305 ntBASIC0.39□□□□□ -2.35
SHANK2Q9UPX8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.39□□□□□ -2.35
SHANK2Q9UPX8 AC132479.1-201ENST00000449160 144 ntBASIC0.39□□□□□ -2.35
SHANK2Q9UPX8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.39□□□□□ -2.35
SHANK2Q9UPX8 MTCO2P15-201ENST00000532655 656 ntBASIC0.39□□□□□ -2.35
SHANK2Q9UPX8 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.39□□□□□ -2.35
SHANK2Q9UPX8 AC108676.2-201ENST00000605225 163 ntBASIC0.39□□□□□ -2.35
SHANK2Q9UPX8 AL603758.1-201ENST00000618654 241 ntBASIC0.39□□□□□ -2.35
SHANK2Q9UPX8 AC009033.1-201ENST00000624279 431 ntBASIC0.39□□□□□ -2.35
SHANK2Q9UPX8 MTCO1P18-201ENST00000455518 1419 ntBASIC0.39□□□□□ -2.35
SHANK2Q9UPX8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 AC119751.3-201ENST00000399720 670 ntBASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 AL353621.1-201ENST00000418219 243 ntBASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 AC007435.1-201ENST00000421086 415 ntBASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 FAM204CP-201ENST00000424489 642 ntBASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 RPL26P26-201ENST00000480251 434 ntBASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 AC084024.2-201ENST00000503480 791 ntBASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 RNU6-581P-201ENST00000516214 105 ntBASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 RNU5B-3P-201ENST00000516601 115 ntBASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 ARL2BPP5-201ENST00000523141 481 ntBASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 TRAV32-201ENST00000553993 340 ntBASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 MZT1P2-201ENST00000604387 248 ntBASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 AL138726.1-201ENST00000614873 333 ntBASIC0.38□□□□□ -2.35
SHANK2Q9UPX8 RNU6-45P-201ENST00000384471 107 ntBASIC0.37□□□□□ -2.35
SHANK2Q9UPX8 MIR525-201ENST00000384978 85 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms