Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC069304.2-201ENST00000605154 435 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 AC012557.2-201ENST00000605919 418 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 AL109659.3-201ENST00000624985 950 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 AC023934.1-201ENST00000574529 2389 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 Y_RNA.185-201ENST00000363894 100 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 RNU6-1327P-201ENST00000365302 105 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 RNU6-43P-201ENST00000384302 107 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
SCN11AQ9UI33 AC098869.1-201ENST00000481627 292 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 AC118282.2-201ENST00000508739 374 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.06□□□□□ -2.4
SCN11AQ9UI33 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
SCN11AQ9UI33 AL031176.1-201ENST00000604554 466 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.06□□□□□ -2.4
SCN11AQ9UI33 AL391994.1-201ENST00000254724 282 ntBASIC0.05□□□□□ -2.4
SCN11AQ9UI33 AC127391.1-201ENST00000411737 98 ntBASIC0.05□□□□□ -2.4
SCN11AQ9UI33 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.05□□□□□ -2.4
SCN11AQ9UI33 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.05□□□□□ -2.4
SCN11AQ9UI33 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.05□□□□□ -2.4
SCN11AQ9UI33 AC017083.3-201ENST00000609955 700 ntBASIC0.05□□□□□ -2.4
SCN11AQ9UI33 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.05□□□□□ -2.4
SCN11AQ9UI33 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 SNORD14D-201ENST00000384390 87 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
SCN11AQ9UI33 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.04□□□□□ -2.4
SCN11AQ9UI33 AC244505.3-201ENST00000454598 187 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 AC112771.1-201ENST00000463581 102 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 ARL2BPP5-201ENST00000523141 481 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.04□□□□□ -2.4
SCN11AQ9UI33 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.04□□□□□ -2.4
SCN11AQ9UI33 AC091489.2-201ENST00000566263 604 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.04□□□□□ -2.4
SCN11AQ9UI33 uc_338.15-201ENST00000615470 191 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 MIR101-1-201ENST00000362265 75 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 SNX2P2-201ENST00000424553 323 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.04□□□□□ -2.4
SCN11AQ9UI33 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.04□□□□□ -2.4
SCN11AQ9UI33 RPL26P26-201ENST00000480251 434 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 PTP4A1P4-201ENST00000512479 322 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 ROCK1P1-201ENST00000573767 549 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 AC012213.3-201ENST00000577199 777 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 MIR4768-201ENST00000585270 74 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 Pinc.1-201ENST00000616452 154 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 AC040168.1-201ENST00000623594 991 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 PCMTD1P7-201ENST00000634506 357 ntBASIC0.04□□□□□ -2.4
SCN11AQ9UI33 MIR135A2-201ENST00000384854 100 ntBASIC0.03□□□□□ -2.4
SCN11AQ9UI33 NDUFS5P4-201ENST00000412983 318 ntBASIC0.03□□□□□ -2.4
SCN11AQ9UI33 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.03□□□□□ -2.4
SCN11AQ9UI33 RPL37P21-201ENST00000435890 276 ntBASIC0.03□□□□□ -2.4
SCN11AQ9UI33 AL353706.1-201ENST00000436728 494 ntBASIC0.03□□□□□ -2.4
SCN11AQ9UI33 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.03□□□□□ -2.4
SCN11AQ9UI33 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.03□□□□□ -2.4
SCN11AQ9UI33 AC010587.2-201ENST00000511727 448 ntBASIC0.03□□□□□ -2.4
SCN11AQ9UI33 AC022483.1-201ENST00000514020 567 ntBASIC0.03□□□□□ -2.4
SCN11AQ9UI33 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.03□□□□□ -2.4
SCN11AQ9UI33 AC007834.2-201ENST00000536310 343 ntBASIC0.03□□□□□ -2.4
SCN11AQ9UI33 BNIP3P27-201ENST00000599991 412 ntBASIC0.03□□□□□ -2.4
SCN11AQ9UI33 AL022067.1-201ENST00000602426 454 ntBASIC0.03□□□□□ -2.4
SCN11AQ9UI33 AC105129.3-201ENST00000605455 485 ntBASIC0.03□□□□□ -2.4
SCN11AQ9UI33 AC040896.1-201ENST00000613819 479 ntBASIC0.03□□□□□ -2.4
SCN11AQ9UI33 MTND5P31-201ENST00000419366 1374 ntBASIC0.03□□□□□ -2.41
SCN11AQ9UI33 RNU6-923P-201ENST00000364753 107 ntBASIC0.02□□□□□ -2.41
SCN11AQ9UI33 RNU6-441P-201ENST00000384545 106 ntBASIC0.02□□□□□ -2.41
SCN11AQ9UI33 Y_RNA.571-201ENST00000384753 98 ntBASIC0.02□□□□□ -2.41
SCN11AQ9UI33 NANOGP2-201ENST00000435391 727 ntBASIC0.02□□□□□ -2.41
SCN11AQ9UI33 TIMM9P1-201ENST00000436122 256 ntBASIC0.02□□□□□ -2.41
SCN11AQ9UI33 RPL26P6-201ENST00000440913 438 ntBASIC0.02□□□□□ -2.41
SCN11AQ9UI33 RNA5SP291-201ENST00000517222 105 ntBASIC0.02□□□□□ -2.41
SCN11AQ9UI33 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.02□□□□□ -2.41
SCN11AQ9UI33 AC090330.1-201ENST00000588646 764 ntBASIC0.02□□□□□ -2.41
SCN11AQ9UI33 AP001596.2-201ENST00000608410 312 ntBASIC0.02□□□□□ -2.41
SCN11AQ9UI33 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
SCN11AQ9UI33 RNU6-741P-201ENST00000383889 107 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 RNU6-30P-201ENST00000384561 107 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 RNU1-119P-201ENST00000391122 165 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.01□□□□□ -2.41
SCN11AQ9UI33 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.01□□□□□ -2.41
SCN11AQ9UI33 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.01□□□□□ -2.41
SCN11AQ9UI33 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.01□□□□□ -2.41
SCN11AQ9UI33 RNA5SP255-201ENST00000516370 107 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.01□□□□□ -2.41
SCN11AQ9UI33 AC109329.1-201ENST00000518744 317 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 AL355802.4-201ENST00000607635 548 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 AL365434.2-201ENST00000607979 234 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 RNU2-48P-201ENST00000410694 191 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 RNU6-1054P-201ENST00000411293 104 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.01□□□□□ -2.41
SCN11AQ9UI33 MTCO2P12-201ENST00000427426 682 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 FO393419.3-201ENST00000428741 282 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.01□□□□□ -2.41
SCN11AQ9UI33 MIR3167-201ENST00000579623 85 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 AC073410.2-201ENST00000603240 332 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.01□□□□□ -2.41
SCN11AQ9UI33 MIR942-201ENST00000401111 86 ntBASIC0□□□□□ -2.41
SCN11AQ9UI33 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0□□□□□ -2.41
SCN11AQ9UI33 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0□□□□□ -2.41
SCN11AQ9UI33 UBE2V1P8-201ENST00000437166 265 ntBASIC0□□□□□ -2.41
SCN11AQ9UI33 SNRPGP12-201ENST00000449481 213 ntBASIC0□□□□□ -2.41
SCN11AQ9UI33 MTND2P24-201ENST00000453434 806 ntBASIC0□□□□□ -2.41
SCN11AQ9UI33 RNA5SP168-201ENST00000516642 112 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms