Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RNU6-596P-201ENST00000365395 98 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 U8.9-201ENST00000365667 134 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 Y_RNA.463-201ENST00000384271 102 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 RNU6-308P-201ENST00000390957 107 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 RPS4XP3-201ENST00000398541 413 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 RNA5SP120-201ENST00000410900 112 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.38□□□□□ -1.87
DKK3Q9UBP4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.38□□□□□ -1.87
DKK3Q9UBP4 USMG5P1-201ENST00000425964 177 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 USP9YP30-201ENST00000430729 455 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 AC115115.1-201ENST00000449927 248 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 RNU7-187P-201ENST00000458985 68 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 RPS29P12-201ENST00000460178 152 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 RPL7P42-201ENST00000481005 679 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 RNU6-470P-201ENST00000515954 104 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 RNU6-307P-201ENST00000516743 106 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 RN7SKP295-201ENST00000517264 153 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.38□□□□□ -1.87
DKK3Q9UBP4 AC005899.2-201ENST00000584353 90 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.38□□□□□ -1.87
DKK3Q9UBP4 AP000787.2-201ENST00000604432 568 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 AC007938.3-201ENST00000604965 623 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 AC011890.2-201ENST00000613393 294 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 AC092608.2-201ENST00000624427 218 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 AL365361.1-201ENST00000566942 3481 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.38□□□□□ -1.87
DKK3Q9UBP4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
DKK3Q9UBP4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AC007785.2-201ENST00000598627 1916 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 RNU6-490P-201ENST00000362985 107 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 RNA5SP197-201ENST00000363357 119 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 RNU6-799P-201ENST00000363567 107 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 RNU6-1032P-201ENST00000384100 107 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 SNORA41-201ENST00000384675 132 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 RNU6-55P-201ENST00000411092 107 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AL592148.1-201ENST00000413568 445 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AC092047.1-201ENST00000424997 240 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AC005300.1-201ENST00000428401 373 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AL158071.1-201ENST00000430315 461 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AL627311.1-201ENST00000431514 115 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 RPL23AP22-201ENST00000437556 453 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.37□□□□□ -1.87
DKK3Q9UBP4 MIR2053-201ENST00000459295 91 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AC107934.2-201ENST00000518653 310 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.37□□□□□ -1.87
DKK3Q9UBP4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AC023442.1-201ENST00000531247 422 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AC005476.1-201ENST00000554427 397 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AC008737.2-201ENST00000599446 118 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DKK3Q9UBP4 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AC008121.3-201ENST00000618726 433 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 AC091925.1-201ENST00000623204 462 ntBASIC3.37□□□□□ -1.87
DKK3Q9UBP4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.37□□□□□ -1.87
DKK3Q9UBP4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DKK3Q9UBP4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.37□□□□□ -1.87
DKK3Q9UBP4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
DKK3Q9UBP4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DKK3Q9UBP4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 Y_RNA.148-201ENST00000363557 117 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 Y_RNA.151-201ENST00000363566 112 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 RNU6-306P-201ENST00000384617 107 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 MIR517A-201ENST00000385001 87 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 SNORD73A-201ENST00000386062 65 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 SNORA48.5-201ENST00000391143 135 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 SNORA40C-201ENST00000391285 128 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AL445529.1-201ENST00000398713 389 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 U3.42-201ENST00000408746 214 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 Y_RNA.623-201ENST00000411128 95 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AL030996.1-201ENST00000411430 235 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AC007919.1-201ENST00000429380 217 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 Z82210.1-201ENST00000440037 231 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 DAP3P1-201ENST00000441522 278 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AL590664.1-201ENST00000448065 339 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 KC877373.1-201ENST00000479066 408 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AC110794.1-201ENST00000505816 425 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AL645944.1-201ENST00000603857 493 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AC136601.2-201ENST00000604356 474 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AC073657.2-201ENST00000605661 303 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AC083806.3-201ENST00000614016 455 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 MIR8057-201ENST00000620957 69 ntBASIC3.36□□□□□ -1.87
DKK3Q9UBP4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DKK3Q9UBP4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms