Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MIR1244-4-202ENST00000636813 85 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 AC032011.1-201ENST00000611703 1549 ntBASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 RNU6-874P-201ENST00000362390 105 ntBASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 Y_RNA.476-201ENST00000384347 108 ntBASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 RNU6ATAC-201ENST00000408749 126 ntBASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 Y_RNA.592-201ENST00000410274 109 ntBASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 AL445584.1-201ENST00000431451 330 ntBASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 AC098831.1-201ENST00000440661 216 ntBASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 RNA5SP310-201ENST00000459084 116 ntBASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 NACAP3-201ENST00000552100 481 ntBASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 RPS29P30-201ENST00000600975 111 ntBASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 AL390123.1-201ENST00000603216 237 ntBASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 CEP170P1-201ENST00000502249 4587 ntBASIC3.82□□□□□ -1.8
PPARGC1AQ9UBK2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 RNU6-1318P-201ENST00000365389 103 ntBASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 RNU6-1035P-201ENST00000384477 107 ntBASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 MIR134-201ENST00000385258 73 ntBASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 AL513124.1-201ENST00000450410 614 ntBASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 RPL23AP49-201ENST00000492925 468 ntBASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 RNU6-1271P-201ENST00000517049 105 ntBASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 MIR2355-201ENST00000517199 87 ntBASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 AC109329.1-201ENST00000518744 317 ntBASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 AL356157.2-201ENST00000605122 111 ntBASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 U7.8-201ENST00000619968 63 ntBASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 AC090617.7-201ENST00000623952 126 ntBASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 AP000553.6-201ENST00000641242 118 ntBASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PPARGC1AQ9UBK2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 RNU6-942P-201ENST00000363002 107 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 SNORA51.11-201ENST00000384442 131 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 RNA5SP494-201ENST00000410653 129 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 RNU7-169P-201ENST00000459456 61 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 RN7SL330P-201ENST00000469709 307 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 RN7SL283P-201ENST00000489055 303 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 SNORA25.11-201ENST00000515935 105 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 RNY3P15-201ENST00000516297 97 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 RNU6-711P-201ENST00000517255 106 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 AC062037.2-201ENST00000610137 73 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 AL121772.2-201ENST00000614331 297 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 AL159153.1-201ENST00000619688 317 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 AC034229.5-201ENST00000624258 185 ntBASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PPARGC1AQ9UBK2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 RNU1-76P-201ENST00000362903 159 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 Y_RNA.123-201ENST00000363338 102 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 RNU6-527P-201ENST00000363425 104 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 RNY3P11-201ENST00000364153 102 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 MIR554-201ENST00000384874 96 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 SNORA12.2-201ENST00000391040 156 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 RNU1-101P-201ENST00000391171 127 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 AL356968.1-201ENST00000416622 474 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 AC002075.2-201ENST00000425207 252 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 DYNLT3P2-201ENST00000442517 295 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 RN7SL542P-201ENST00000467147 294 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 RPL23AP14-201ENST00000468281 468 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 RNU6-408P-201ENST00000515910 100 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 RNU7-175P-201ENST00000515915 61 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 AC034114.1-201ENST00000520293 285 ntBASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.79□□□□□ -1.8
PPARGC1AQ9UBK2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms