Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AL365400.1-201ENST00000431854 640 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 CALM1P1-201ENST00000442082 433 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 CYP2C59P-201ENST00000457790 269 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 CKS1BP2-201ENST00000497342 240 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 RPL38P4-201ENST00000502376 214 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AC117522.2-201ENST00000510049 657 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AF213884.2-201ENST00000510417 903 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AC010486.3-201ENST00000511602 785 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 MIR4775-201ENST00000581168 75 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 MIR5002-201ENST00000584713 97 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 BNIP3P30-201ENST00000601184 574 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 Z84480.1-201ENST00000605131 311 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AL138963.2-201ENST00000605137 226 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 uc_338.11-201ENST00000619132 160 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 Z69908.1-201ENST00000622603 247 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AL390237.1-201ENST00000404226 1415 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 RNU6-181P-201ENST00000363225 107 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 RNU6-550P-201ENST00000391057 101 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 PGBD4P6-201ENST00000421501 610 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 EIF4EP4-201ENST00000424916 578 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 AL139109.1-201ENST00000455491 297 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 AC104435.1-201ENST00000483483 166 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 ARL2BPP4-201ENST00000506854 471 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 AC104136.1-201ENST00000512969 394 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 Y_RNA.687-201ENST00000516558 91 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 RNU6-445P-201ENST00000516949 107 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 RNA5SP503-201ENST00000517047 117 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 PSMA3P-201ENST00000555485 635 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 AC136619.2-201ENST00000563361 631 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 MIR3913-1-201ENST00000577744 102 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 AC021646.1-201ENST00000605469 484 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 AC009233.1-201ENST00000616477 371 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 U4atac.1-201ENST00000618345 95 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 MIR7843-201ENST00000622274 79 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 AC009161.2-201ENST00000624626 138 ntBASIC1.82□□□□□ -2.12
CLCF1Q9UBD9 ELL2P3-201ENST00000457883 1602 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AP006437.1-201ENST00000641440 3685 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 RNU6-1010P-201ENST00000362757 107 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 RNU6-282P-201ENST00000365357 103 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 RNU4-48P-201ENST00000365559 182 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 UBE2V1P10-201ENST00000414685 269 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC000111.3-201ENST00000433478 193 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AL596276.1-201ENST00000434465 418 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 MTND2P4-201ENST00000445034 1004 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 USP9YP29-201ENST00000445112 563 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC079448.1-201ENST00000449377 373 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 RNU6-956P-201ENST00000458868 103 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC090515.1-201ENST00000465295 476 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC140059.1-201ENST00000489238 361 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 RNU1-86P-201ENST00000516108 154 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 RNU1-107P-201ENST00000516617 154 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC109329.1-201ENST00000518744 317 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC025811.1-201ENST00000604312 472 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC008945.2-201ENST00000606056 604 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC093788.1-201ENST00000609356 927 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC009318.2-201ENST00000610917 651 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 RMST_4.1-201ENST00000616886 107 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC026585.1-201ENST00000619582 524 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC099842.1-201ENST00000619919 596 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 AC241585.2-209ENST00000638217 143 ntBASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CLCF1Q9UBD9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AL596028.1-201ENST00000326971 197 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 RNU4-52P-201ENST00000384209 138 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 RNU6-45P-201ENST00000384471 107 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 RNU1-57P-201ENST00000384491 166 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 SNORD116-20-201ENST00000384529 92 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 HMGN2P38-201ENST00000423806 265 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AL031667.1-201ENST00000440222 725 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms