Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CNTN3Q9P232 HMGN2P16-201ENST00000456802 261 ntBASIC4.42□□□□□ -1.7
CNTN3Q9P232 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.42□□□□□ -1.7
CNTN3Q9P232 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.42□□□□□ -1.7
CNTN3Q9P232 RNU7-110P-201ENST00000516891 62 ntBASIC4.42□□□□□ -1.7
CNTN3Q9P232 AC087441.2-201ENST00000529141 262 ntBASIC4.42□□□□□ -1.7
CNTN3Q9P232 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.42□□□□□ -1.7
CNTN3Q9P232 H3F3AP1-201ENST00000559984 334 ntBASIC4.42□□□□□ -1.7
CNTN3Q9P232 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.42□□□□□ -1.7
CNTN3Q9P232 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.42□□□□□ -1.7
CNTN3Q9P232 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.42□□□□□ -1.7
CNTN3Q9P232 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CNTN3Q9P232 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.42□□□□□ -1.7
CNTN3Q9P232 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.42□□□□□ -1.7
CNTN3Q9P232 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
CNTN3Q9P232 AC011266.1-201ENST00000624119 3569 ntBASIC4.42□□□□□ -1.7
CNTN3Q9P232 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CNTN3Q9P232 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNTN3Q9P232 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNTN3Q9P232 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNTN3Q9P232 SNORA25.1-201ENST00000362326 128 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 Y_RNA.122-201ENST00000363331 96 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 RNU6-1020P-201ENST00000363684 107 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 RNU6-682P-201ENST00000363843 106 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 SNORD74.4-201ENST00000364129 80 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 Y_RNA.230-201ENST00000364348 109 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 RNU6-740P-201ENST00000364734 105 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 RNU6-514P-201ENST00000384208 107 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 RNU6-281P-201ENST00000384212 103 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 RNU6-159P-201ENST00000391080 106 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 RNA5SP39-201ENST00000411245 120 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 AC074117.2-201ENST00000417130 397 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.41□□□□□ -1.7
CNTN3Q9P232 AC125238.1-201ENST00000448842 249 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.41□□□□□ -1.7
CNTN3Q9P232 AC117440.1-201ENST00000474107 571 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 RPL29P14-201ENST00000495837 428 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 AC020593.1-201ENST00000507399 299 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 AC026402.1-201ENST00000513642 170 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 RNU7-143P-201ENST00000516781 65 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 AC027288.2-201ENST00000553028 243 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.41□□□□□ -1.7
CNTN3Q9P232 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.41□□□□□ -1.7
CNTN3Q9P232 AC012468.1-201ENST00000604888 430 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 AC019159.1-201ENST00000605094 187 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 MIR432-201ENST00000606207 94 ntBASIC4.41□□□□□ -1.7
CNTN3Q9P232 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.41□□□□□ -1.7
CNTN3Q9P232 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.41□□□□□ -1.7
CNTN3Q9P232 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.41□□□□□ -1.7
CNTN3Q9P232 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNTN3Q9P232 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.41□□□□□ -1.7
CNTN3Q9P232 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CNTN3Q9P232 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CNTN3Q9P232 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNTN3Q9P232 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CNTN3Q9P232 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CNTN3Q9P232 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CNTN3Q9P232 RNU6-1159P-201ENST00000362933 107 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 Y_RNA.286-201ENST00000364813 102 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 RNU6-187P-201ENST00000384139 106 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 Y_RNA.506-201ENST00000384494 102 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 MIR10B-201ENST00000385011 110 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 MIR888-201ENST00000401186 77 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 MIR548I2-201ENST00000408348 149 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.4□□□□□ -1.71
CNTN3Q9P232 NDUFB4P6-201ENST00000436819 366 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.4□□□□□ -1.71
CNTN3Q9P232 HMGB3P8-201ENST00000449709 577 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.4□□□□□ -1.71
CNTN3Q9P232 RPL26P26-201ENST00000480251 434 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 AC091874.1-201ENST00000511402 339 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 Y_RNA.683-201ENST00000516508 93 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 MIR5571-201ENST00000577998 113 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 MIR4282-201ENST00000583613 67 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 AC020895.1-201ENST00000595362 272 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.4□□□□□ -1.71
CNTN3Q9P232 AC132825.6-201ENST00000638861 357 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.4□□□□□ -1.71
CNTN3Q9P232 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.4□□□□□ -1.71
CNTN3Q9P232 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CNTN3Q9P232 AC016588.2-201ENST00000632484 3021 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 CUL1P1-201ENST00000509510 2425 ntBASIC4.4□□□□□ -1.71
CNTN3Q9P232 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.39□□□□□ -1.71
CNTN3Q9P232 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.39□□□□□ -1.71
CNTN3Q9P232 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CNTN3Q9P232 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CNTN3Q9P232 HAUS6P2-201ENST00000433254 2404 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNTN3Q9P232 RNA5SP361-201ENST00000362686 118 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 SNORD56.1-201ENST00000362913 68 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 RNU6-626P-201ENST00000363354 107 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 SNORD115-8-201ENST00000363856 82 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 Y_RNA.275-201ENST00000364726 110 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 SNORD115-38-201ENST00000365037 82 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 U8.10-201ENST00000384260 133 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 SNORA37-201ENST00000384504 129 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 RNU6-125P-201ENST00000384505 107 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 MTCO2P33-201ENST00000402100 465 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 Y_RNA.590-201ENST00000410140 107 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 RNU4-30P-201ENST00000410245 143 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms