Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC092192.1-201ENST00000633154 1018 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC88CQ9P219 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC88CQ9P219 RNU6-1210P-201ENST00000363775 107 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC88CQ9P219 SNORD116-20-201ENST00000384529 92 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 MIR548J-201ENST00000408833 112 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 RNU2-39P-201ENST00000410604 198 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC88CQ9P219 MTCO2P21-201ENST00000419780 677 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 PTENP1-201ENST00000447117 1215 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 AC093899.1-201ENST00000457984 376 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 SNORA4-201ENST00000584302 138 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 AC021171.1-201ENST00000603137 706 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 AC091152.3-201ENST00000604227 325 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC88CQ9P219 AL022345.1-201ENST00000607292 135 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 AC018645.2-201ENST00000609151 472 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 AP000484.1-201ENST00000620067 1252 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 SCARNA4-202ENST00000625402 129 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC88CQ9P219 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC88CQ9P219 AC092104.1-201ENST00000497346 1441 ntBASIC1.04□□□□□ -2.24
CCDC88CQ9P219 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CCDC88CQ9P219 RPL21P1-201ENST00000399532 476 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 RNU2-23P-201ENST00000410545 195 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 VPS26BP1-201ENST00000417155 755 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 ELOCP9-201ENST00000418624 239 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 NCOR1P3-201ENST00000420479 303 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 AC104651.1-201ENST00000427559 735 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.03□□□□□ -2.24
CCDC88CQ9P219 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.03□□□□□ -2.24
CCDC88CQ9P219 MTND4P25-201ENST00000441039 533 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 NEFMP1-201ENST00000443423 1006 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 AP001324.2-201ENST00000461163 319 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 RPS29P1-201ENST00000465274 159 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 AC109927.2-201ENST00000506416 303 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 ARL2BPP4-201ENST00000506854 471 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC88CQ9P219 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.03□□□□□ -2.24
CCDC88CQ9P219 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.03□□□□□ -2.24
CCDC88CQ9P219 MIR3146-201ENST00000580367 79 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 AL136313.1-201ENST00000624804 202 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.03□□□□□ -2.24
CCDC88CQ9P219 FARSBP1-201ENST00000435808 1778 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 AP000776.1-201ENST00000530032 1663 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 AP000560.1-201ENST00000624150 1937 ntBASIC1.03□□□□□ -2.24
CCDC88CQ9P219 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
CCDC88CQ9P219 RNU1-93P-201ENST00000364704 169 ntBASIC1.03□□□□□ -2.25
CCDC88CQ9P219 RNU6-83P-201ENST00000384568 112 ntBASIC1.03□□□□□ -2.25
CCDC88CQ9P219 AC119751.3-201ENST00000399720 670 ntBASIC1.03□□□□□ -2.25
CCDC88CQ9P219 RNU2-41P-201ENST00000410991 178 ntBASIC1.03□□□□□ -2.25
CCDC88CQ9P219 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.03□□□□□ -2.25
CCDC88CQ9P219 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.03□□□□□ -2.25
CCDC88CQ9P219 AL593851.1-201ENST00000426171 157 ntBASIC1.03□□□□□ -2.25
CCDC88CQ9P219 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.03□□□□□ -2.25
CCDC88CQ9P219 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.03□□□□□ -2.25
CCDC88CQ9P219 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.03□□□□□ -2.25
CCDC88CQ9P219 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.03□□□□□ -2.25
CCDC88CQ9P219 RPS3AP22-201ENST00000488297 769 ntBASIC1.03□□□□□ -2.25
CCDC88CQ9P219 RNU6-1183P-201ENST00000517054 60 ntBASIC1.03□□□□□ -2.25
CCDC88CQ9P219 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.03□□□□□ -2.25
CCDC88CQ9P219 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.03□□□□□ -2.25
CCDC88CQ9P219 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.03□□□□□ -2.25
CCDC88CQ9P219 MIR544B-201ENST00000582372 78 ntBASIC1.03□□□□□ -2.25
CCDC88CQ9P219 AC243960.4-201ENST00000600532 288 ntBASIC1.03□□□□□ -2.25
CCDC88CQ9P219 VN1R82P-201ENST00000601481 356 ntBASIC1.03□□□□□ -2.25
CCDC88CQ9P219 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.03□□□□□ -2.25
CCDC88CQ9P219 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.03□□□□□ -2.25
CCDC88CQ9P219 FRG1KP-201ENST00000623592 341 ntBASIC1.03□□□□□ -2.25
CCDC88CQ9P219 U6.99-201ENST00000637524 83 ntBASIC1.03□□□□□ -2.25
CCDC88CQ9P219 AC092125.1-201ENST00000562568 1995 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 AL391994.1-201ENST00000254724 282 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 RNU4-92P-201ENST00000363783 136 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 SNORA18.2-201ENST00000383865 132 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 MIR518A2-201ENST00000384966 87 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC88CQ9P219 AL022400.1-201ENST00000423946 935 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.02□□□□□ -2.25
CCDC88CQ9P219 AC137499.1-201ENST00000427602 88 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 RPS24P1-201ENST00000438550 371 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 AC004854.1-201ENST00000440356 349 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.02□□□□□ -2.25
CCDC88CQ9P219 MTND3P3-201ENST00000505004 126 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 AC092436.3-201ENST00000511788 257 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 RN7SKP265-201ENST00000516448 223 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 Y_RNA.689-201ENST00000516589 107 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 RNA5SP480-201ENST00000516840 109 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 RN7SKP256-201ENST00000517201 314 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.02□□□□□ -2.25
CCDC88CQ9P219 TRAV32-201ENST00000553993 340 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 PCMTD1P2-201ENST00000565017 355 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.02□□□□□ -2.25
CCDC88CQ9P219 VN1R107P-201ENST00000601784 209 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 AL161798.1-201ENST00000604630 131 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC88CQ9P219 AP000240.1-201ENST00000609910 452 ntBASIC1.02□□□□□ -2.25
CCDC88CQ9P219 MIR6134-201ENST00000617606 109 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms