Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 Y_RNA.245-201ENST00000364493 95 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 RNU6-336P-201ENST00000364891 107 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 RNU6-102P-201ENST00000384485 104 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 SNORA40C-201ENST00000391285 128 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 SNORD58.1-201ENST00000391313 66 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 PCNPP3-201ENST00000393579 471 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 HLFP1-201ENST00000402375 499 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 AL139247.1-201ENST00000422768 325 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 AC007560.1-201ENST00000426912 237 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 AL513124.1-201ENST00000450410 614 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 RN7SL93P-201ENST00000463035 293 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 RPL21P13-201ENST00000488305 481 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 HMGB1P22-201ENST00000505315 124 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 SCARNA15.2-201ENST00000516409 127 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 RNA5SP290-201ENST00000517133 127 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 AC023824.2-201ENST00000566185 400 ntBASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PARPBPQ9NWS1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.4□□□□□ -1.86
PARPBPQ9NWS1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PARPBPQ9NWS1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PARPBPQ9NWS1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 DEFB108F-201ENST00000344638 222 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 RNU6-1266P-201ENST00000362794 105 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 RNU6-173P-201ENST00000364215 104 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 RNY1-201ENST00000364228 113 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 Y_RNA.439-201ENST00000384119 94 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 AL079342.1-201ENST00000401460 267 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 Y_RNA.602-201ENST00000410535 92 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 SNORA57.3-201ENST00000411095 141 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 AL139156.1-201ENST00000412785 841 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 RPL17P36-201ENST00000420302 549 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 AL365440.1-201ENST00000436135 2167 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 AL500522.2-201ENST00000448562 343 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 TOMM22P6-201ENST00000465035 409 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 KC877373.1-201ENST00000479066 408 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 RNU6-572P-201ENST00000516724 80 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 MRPS36P4-201ENST00000534436 298 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 AP002770.2-201ENST00000543613 532 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 AC093023.1-201ENST00000547375 507 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 HSPE1P5-201ENST00000561489 272 ntBASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.4□□□□□ -1.87
PARPBPQ9NWS1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 RNU6-222P-201ENST00000362438 107 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 RN7SKP280-201ENST00000364196 304 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 RNA5SP479-201ENST00000364858 117 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 Y_RNA.352-201ENST00000365439 102 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 RNU6-187P-201ENST00000384139 106 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 RNU6-886P-201ENST00000384319 105 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 RNU6-937P-201ENST00000384325 106 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 MIR30B-201ENST00000384850 88 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 RNU6-493P-201ENST00000391321 108 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 MRPL35P1-201ENST00000404272 572 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 RNU2-71P-201ENST00000411395 189 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 RPL27AP8-201ENST00000424277 446 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 PIGFP3-201ENST00000441918 722 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 AC092798.1-201ENST00000458542 409 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 RPL23AP14-201ENST00000468281 468 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 RPS20P22-201ENST00000473700 357 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 AL160314.1-201ENST00000490836 438 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 BTF3L4P4-201ENST00000506381 449 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 RNA5SP165-201ENST00000517142 115 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 AC104581.2-201ENST00000572227 430 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 SNORD84-203ENST00000584275 78 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 AC060766.3-201ENST00000591442 263 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 BRDTP1-201ENST00000605735 677 ntBASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms