Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AL591926.4-201ENST00000616895 298 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 CR381572.2-201ENST00000624852 397 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 U3.22-201ENST00000391120 215 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 MIR298-201ENST00000401212 88 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 RNU2-54P-201ENST00000410299 190 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 RNA5SP89-201ENST00000410300 108 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 RNU6-1199P-201ENST00000411249 104 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 AC243964.1-201ENST00000441814 261 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 AC010095.1-201ENST00000443543 144 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 HMGN2P7-201ENST00000456186 273 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 RN7SKP46-201ENST00000515942 234 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 RNA5SP249-201ENST00000516127 99 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 RNU6-168P-201ENST00000516189 101 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 RNU6-155P-201ENST00000516347 100 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 SNORA43.2-201ENST00000516652 128 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 AP001880.2-201ENST00000538233 448 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 MIR5571-201ENST00000577998 113 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 FAM27B-201ENST00000610601 213 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 AC004467.1-201ENST00000615678 330 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.63□□□□□ -1.67
CUEDC1Q9NWM3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 RNU6-140P-201ENST00000384566 108 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 SNORA1.3-201ENST00000384676 136 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 AP000567.1-201ENST00000406413 156 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 AC114755.2-201ENST00000413520 361 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 SNORA71B-202ENST00000439232 272 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 RNU7-107P-201ENST00000459121 61 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 AC092991.1-201ENST00000477176 376 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 AL132838.2-201ENST00000492041 314 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 RPL36AP41-201ENST00000493820 306 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 AC091868.1-201ENST00000508746 304 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 AP004607.1-201ENST00000524456 203 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 MIR5699-201ENST00000578903 90 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 AC012531.5-201ENST00000611375 151 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 MIR6076-201ENST00000617521 113 ntBASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CUEDC1Q9NWM3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 MTND5P32-201ENST00000560711 1802 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 RNA5SP388-201ENST00000362584 119 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 SNORD32A-201ENST00000364805 84 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 Y_RNA.498-201ENST00000384460 102 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 MIR626-201ENST00000385032 94 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 RNU1-82P-201ENST00000390851 165 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 RNU6-763P-201ENST00000390865 106 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 U3.37-201ENST00000408528 213 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 RNA5SP113-201ENST00000410486 84 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 RNU2-68P-201ENST00000410878 191 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 EIF4HP2-201ENST00000424380 563 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 RPL30P14-201ENST00000482744 348 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 AC006499.6-201ENST00000511169 607 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms