Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC098614.4-201ENST00000607601 462 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AC099842.1-201ENST00000619919 596 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 MIR126-201ENST00000362291 85 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 RNU6-942P-201ENST00000363002 107 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 RNU5F-7P-201ENST00000363696 115 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 RNU6-501P-201ENST00000364072 100 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 RNU6-584P-201ENST00000410350 95 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 RNU2-32P-201ENST00000411193 191 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AC007283.2-201ENST00000424739 197 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.54□□□□□ -2.16
TREX1Q9NSU2 MTCYBP39-201ENST00000437562 491 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.54□□□□□ -2.16
TREX1Q9NSU2 CALM1P1-201ENST00000442082 433 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AC108078.2-201ENST00000510750 236 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 RNU6-548P-201ENST00000517083 115 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AP003181.2-201ENST00000528941 181 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AP000763.2-201ENST00000540641 163 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.54□□□□□ -2.16
TREX1Q9NSU2 PCMTD1P2-201ENST00000565017 355 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 MIR3198-2-201ENST00000577868 80 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.54□□□□□ -2.16
TREX1Q9NSU2 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AC004908.3-201ENST00000610248 625 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AC108479.2-201ENST00000617314 601 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AC007671.2-201ENST00000637344 619 ntBASIC1.54□□□□□ -2.16
TREX1Q9NSU2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.54□□□□□ -2.16
TREX1Q9NSU2 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TREX1Q9NSU2 RNU6-212P-201ENST00000362642 104 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 RNU6-655P-201ENST00000362858 107 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 MIR29C-201ENST00000385231 88 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
TREX1Q9NSU2 MIR764-201ENST00000390811 85 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.53□□□□□ -2.16
TREX1Q9NSU2 MIR1323-201ENST00000408090 73 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 RNA5SP111-201ENST00000411386 101 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 OR9R1P-201ENST00000412200 877 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 AC098592.1-201ENST00000419352 333 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.53□□□□□ -2.16
TREX1Q9NSU2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.53□□□□□ -2.16
TREX1Q9NSU2 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.53□□□□□ -2.16
TREX1Q9NSU2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.53□□□□□ -2.16
TREX1Q9NSU2 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.53□□□□□ -2.16
TREX1Q9NSU2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
TREX1Q9NSU2 AC109329.1-201ENST00000518744 317 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 AP003392.2-201ENST00000527269 208 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 CYCSP27-201ENST00000527643 293 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 CR383656.8-201ENST00000549046 145 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.53□□□□□ -2.16
TREX1Q9NSU2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TREX1Q9NSU2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.53□□□□□ -2.16
TREX1Q9NSU2 MIR548AC-201ENST00000585049 88 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 AL359999.1-201ENST00000604513 294 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 RNU6-87P-201ENST00000607561 108 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 AC012409.4-201ENST00000612923 249 ntBASIC1.53□□□□□ -2.16
TREX1Q9NSU2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TREX1Q9NSU2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TREX1Q9NSU2 RNU5F-6P-201ENST00000362979 116 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 SNORD113-6-201ENST00000363345 75 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 RNA5SP190-201ENST00000365222 118 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 RNU6-546P-201ENST00000383991 107 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 RNU6-39P-201ENST00000384344 107 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 RNU6-1274P-201ENST00000384557 107 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 SNORD115.1-201ENST00000391109 76 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 RNA5SP465-201ENST00000391195 109 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 RPS3AP36-201ENST00000398190 775 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.52□□□□□ -2.17
TREX1Q9NSU2 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AL365184.2-201ENST00000431139 435 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AL365400.1-201ENST00000431854 640 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AL606662.1-201ENST00000445763 553 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AC245102.2-201ENST00000448956 180 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.52□□□□□ -2.17
TREX1Q9NSU2 RNU6-991P-201ENST00000516168 107 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 Y_RNA.687-201ENST00000516558 91 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AP003461.1-201ENST00000528866 78 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AC022880.1-201ENST00000534017 973 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AC010928.2-201ENST00000588017 287 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AL138889.2-201ENST00000603883 242 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AL031775.1-201ENST00000607014 887 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AC016597.2-201ENST00000613256 341 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
TREX1Q9NSU2 AC027807.2-201ENST00000616099 408 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.52□□□□□ -2.17
TREX1Q9NSU2 OR4G3P-201ENST00000633500 913 ntBASIC1.52□□□□□ -2.17
TREX1Q9NSU2 WWP1P1-201ENST00000466609 2769 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms