Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RAC1P6-201ENST00000423911 575 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 HSPE1P21-201ENST00000438283 308 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC009902.1-201ENST00000519351 183 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC016727.2-201ENST00000603988 621 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC099654.9-201ENST00000637055 678 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-342P-201ENST00000384521 104 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC119751.3-201ENST00000399720 670 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC116655.1-201ENST00000508324 901 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 MTCYBP43-201ENST00000513621 740 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 RNA5SP436-201ENST00000516020 115 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC087897.1-201ENST00000550134 156 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 VN1R87P-201ENST00000596706 487 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AL161798.1-201ENST00000604630 131 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC004908.3-201ENST00000610248 625 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AC009269.6-201ENST00000621778 588 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 TEX21P-201ENST00000447107 1476 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 MIR424-201ENST00000362227 98 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-942P-201ENST00000363002 107 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-360P-201ENST00000390944 104 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 RNU2-23P-201ENST00000410545 195 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 AL359704.1-201ENST00000411586 781 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 AC104651.1-201ENST00000427559 735 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 MTCYBP42-201ENST00000444653 1130 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 AL353718.1-201ENST00000451028 517 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 AC108729.1-201ENST00000487812 947 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 MTCO3P27-201ENST00000514397 196 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-1225P-201ENST00000516336 65 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 AC005668.1-201ENST00000571142 476 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 HSPE1P19-201ENST00000603327 295 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 MIR6134-201ENST00000617606 109 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 AC123767.1-202ENST00000620407 817 ntBASIC0.78□□□□□ -2.28
KIAA1549Q9HCM3 Y_RNA.67-201ENST00000362870 100 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 RNU5B-4P-201ENST00000363508 111 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 SNORD116-20-201ENST00000384529 92 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 MTND4P25-201ENST00000441039 533 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 AL022238.1-201ENST00000442557 355 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 EEF1E1P1-201ENST00000446998 430 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 RPL30P7-201ENST00000479312 323 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 AC018868.1-201ENST00000491307 315 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 UBL5P1-201ENST00000507979 193 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 AC016957.1-201ENST00000534895 309 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 AC012414.6-201ENST00000568241 401 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 AL358072.1-201ENST00000604156 575 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 MIR98-201ENST00000606724 119 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 RNU6-622P-201ENST00000384272 103 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 AL359634.1-202ENST00000404721 284 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 AL353621.1-201ENST00000418219 243 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 UBE2D3P3-201ENST00000426992 425 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 SNORA31.3-201ENST00000516029 96 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 RNU6-1028P-201ENST00000517164 93 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 DEFB130C-202ENST00000530001 230 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 AC023538.1-201ENST00000534576 736 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 AL132657.2-201ENST00000564417 358 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 BNIP3P30-201ENST00000601184 574 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 CLIC4P2-201ENST00000601934 717 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 AC091948.2-201ENST00000636510 279 ntBASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
KIAA1549Q9HCM3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AL079342.2-201ENST00000403367 482 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 RNU2-32P-201ENST00000411193 191 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC004941.2-201ENST00000427009 228 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 MTND4P15-201ENST00000437913 1033 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 USP9YP17-201ENST00000444617 696 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 MTND1P16-201ENST00000465177 898 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 RNA5SP216-201ENST00000516111 123 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms