Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.41□□□□□ -1.86
MSL2Q9HCI7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.41□□□□□ -1.86
MSL2Q9HCI7 MIR6500-201ENST00000622700 86 ntBASIC3.41□□□□□ -1.86
MSL2Q9HCI7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.41□□□□□ -1.86
MSL2Q9HCI7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
MSL2Q9HCI7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
MSL2Q9HCI7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.41□□□□□ -1.86
MSL2Q9HCI7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.4□□□□□ -1.86
MSL2Q9HCI7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
MSL2Q9HCI7 LINC02555-201ENST00000563933 1951 ntBASIC3.4□□□□□ -1.86
MSL2Q9HCI7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.4□□□□□ -1.86
MSL2Q9HCI7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
MSL2Q9HCI7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
MSL2Q9HCI7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
MSL2Q9HCI7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
MSL2Q9HCI7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.4□□□□□ -1.87
MSL2Q9HCI7 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 RNA5SP399-201ENST00000364003 117 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 SNORA7.2-201ENST00000364446 145 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 RNA5SP515-201ENST00000364570 118 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 SNORA36A-201ENST00000384221 132 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 RNY3P4-201ENST00000384428 101 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 MIR1193-201ENST00000408109 78 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 AC099548.1-201ENST00000421443 426 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 AL356535.1-201ENST00000440335 398 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 snoU13.6-201ENST00000458785 104 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 AF186996.7-201ENST00000492781 209 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.4□□□□□ -1.87
MSL2Q9HCI7 NOL8P1-201ENST00000508336 3529 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 RNU6-581P-201ENST00000516214 105 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 RNU6-928P-201ENST00000516876 104 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 RNA5SP179-201ENST00000517284 121 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 LINC00933-203ENST00000559812 219 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 MIR3160-1-201ENST00000577972 85 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.4□□□□□ -1.87
MSL2Q9HCI7 AL606490.9-201ENST00000603331 271 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 AC091167.4-201ENST00000605079 184 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 AC098479.1-201ENST00000609225 154 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 AL591424.2-201ENST00000617023 128 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 MIR6875-201ENST00000617506 72 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 AC243829.7-201ENST00000633081 225 ntBASIC3.4□□□□□ -1.87
MSL2Q9HCI7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.4□□□□□ -1.87
MSL2Q9HCI7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
MSL2Q9HCI7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 RNU6-50P-201ENST00000362356 103 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 MIR549A-201ENST00000385268 96 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 RPS29P13-201ENST00000402041 169 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 RNU2-71P-201ENST00000411395 189 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 YPEL5P1-201ENST00000419731 367 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 VDAC1P3-201ENST00000434069 851 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 AC007389.2-201ENST00000434630 306 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 AC243964.1-201ENST00000441814 261 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 RN7SL271P-201ENST00000487601 295 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 AC010265.1-201ENST00000513509 211 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 AC024405.2-202ENST00000532731 184 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 GNRHR2P1-201ENST00000555315 631 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 HSPE1P5-201ENST00000561489 272 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 AC009779.6-201ENST00000603972 165 ntBASIC3.39□□□□□ -1.87
MSL2Q9HCI7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSL2Q9HCI7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MSL2Q9HCI7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.38□□□□□ -1.87
MSL2Q9HCI7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
MSL2Q9HCI7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
MSL2Q9HCI7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
MSL2Q9HCI7 AL359693.1-201ENST00000614959 2407 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 Y_RNA.286-201ENST00000364813 102 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 Y_RNA.352-201ENST00000365439 102 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 MIR544A-201ENST00000384855 91 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 RNU6-493P-201ENST00000391321 108 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 PPIAP31-201ENST00000405422 495 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 SNORA3C-201ENST00000408792 125 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.38□□□□□ -1.87
MSL2Q9HCI7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.38□□□□□ -1.87
MSL2Q9HCI7 WARS2P1-201ENST00000429678 537 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.38□□□□□ -1.87
MSL2Q9HCI7 RPS15AP7-201ENST00000439294 405 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 AC012308.1-201ENST00000451232 178 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 ZNF192P1-203ENST00000565888 810 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 VN1R85P-201ENST00000601587 426 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 AC012531.5-201ENST00000611375 151 ntBASIC3.38□□□□□ -1.87
MSL2Q9HCI7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.38□□□□□ -1.87
MSL2Q9HCI7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MSL2Q9HCI7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms