Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC079781.2-201ENST00000446424 169 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 RPL39P29-201ENST00000447779 157 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 FDX1P2-201ENST00000450769 375 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC087884.1-201ENST00000469738 328 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 RNU2-46P-201ENST00000517038 113 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC106038.2-201ENST00000520706 568 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC024614.2-201ENST00000577584 372 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC005771.1-201ENST00000585581 349 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC073539.2-201ENST00000597113 165 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 BNIP3P8-201ENST00000597863 560 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC005000.2-201ENST00000605468 310 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC004908.3-201ENST00000610248 625 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AC131159.1-201ENST00000621854 213 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 Z69720.2-201ENST00000624755 279 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.3□□□□□ -2.2
SND1-IT1Q9HBX3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 snoU2_19.1-201ENST00000362361 80 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 SNORA62.1-201ENST00000364287 154 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 SNORD115-7-201ENST00000365306 82 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 RNU2-3P-201ENST00000410144 191 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AL030996.1-201ENST00000411430 235 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AC011233.1-201ENST00000422812 283 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AL591043.1-201ENST00000432461 424 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AC104850.1-201ENST00000435940 476 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 IFNA20P-201ENST00000436840 528 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 MTND1P30-201ENST00000441241 901 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 RPL30P12-201ENST00000474666 353 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AC104136.1-201ENST00000512969 394 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 RNU2-44P-201ENST00000516795 194 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AC090572.1-201ENST00000519251 160 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 IGKV3-31-201ENST00000523109 329 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AC026464.5-201ENST00000562497 722 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AC137800.2-201ENST00000574375 120 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AC078795.2-201ENST00000602835 1252 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AC012493.3-201ENST00000604494 112 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AL133173.2-201ENST00000614270 90 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 YWHAEP7-203ENST00000622054 312 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 AC079248.2-201ENST00000623779 326 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 U4.7-201ENST00000638126 106 ntBASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
SND1-IT1Q9HBX3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 WWP1P1-201ENST00000466609 2769 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 Y_RNA.367-201ENST00000365544 101 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 RNU11-3P-201ENST00000391111 133 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 POLHP1-201ENST00000411806 470 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 RPS3AP3-201ENST00000411933 242 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AL139156.1-201ENST00000412785 841 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AC010099.3-201ENST00000423896 409 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AC000111.3-201ENST00000433478 193 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AC104806.1-201ENST00000508720 308 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 MTND3P25-201ENST00000509243 135 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AC074344.1-201ENST00000512823 224 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 RNU6-965P-201ENST00000516721 96 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 RNU6-1220P-201ENST00000517126 108 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AP005435.4-201ENST00000529514 284 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AC087883.1-201ENST00000551882 391 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 MIR3198-2-201ENST00000577868 80 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 AC090578.1-201ENST00000604955 591 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms