Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC002984.1-201ENST00000591692 448 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 BNIP3P30-201ENST00000601184 574 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AC012557.2-201ENST00000605919 418 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AC002044.1-201ENST00000606707 158 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AC103810.6-201ENST00000606708 136 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AF250324.2-201ENST00000608299 610 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AC017083.3-201ENST00000609955 700 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 HULC.1-201ENST00000612720 240 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 RMST_4.1-201ENST00000616886 107 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AP003400.5-201ENST00000624827 617 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-859P-201ENST00000362728 107 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-1085P-201ENST00000363576 107 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-434P-201ENST00000384376 107 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 MIR128-1-201ENST00000384921 82 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 AL606923.1-201ENST00000406616 190 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 BX276092.3-201ENST00000424182 230 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 AC018634.1-201ENST00000437554 401 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 LRRC34P2-201ENST00000514850 553 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 RNA5SP401-201ENST00000515920 127 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 SNORA40.12-201ENST00000516329 111 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-314P-201ENST00000516574 104 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 SNORA43.2-201ENST00000516652 128 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 MIR3200-201ENST00000580767 85 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 AC092954.2-201ENST00000609103 430 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 AC093788.1-201ENST00000609356 927 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 AC015540.1-201ENST00000615828 501 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 AC009831.4-201ENST00000620744 325 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 AC097372.5-201ENST00000623665 376 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 AC022418.1-201ENST00000624118 445 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 AC138627.2-201ENST00000624202 601 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 SCARNA4-202ENST00000625402 129 ntBASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
VIPAS39Q9H9C1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 MTND5P30-201ENST00000452896 1731 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 SNORA69-201ENST00000383895 132 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 SNORA48.2-201ENST00000390926 124 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AC097463.2-201ENST00000421074 142 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AL121601.2-201ENST00000438019 707 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 MTND1P1-201ENST00000445453 368 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AC011753.1-201ENST00000451001 220 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 RNU7-26P-201ENST00000458980 63 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 RNU7-180P-201ENST00000459240 63 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AC140059.1-201ENST00000489238 361 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 RNU5B-3P-201ENST00000516601 115 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AP001893.2-201ENST00000526949 202 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AC010186.2-204ENST00000537668 439 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AL512360.1-201ENST00000555346 234 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 MIR3935-201ENST00000583472 104 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 MIR3616-201ENST00000584070 92 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 MIR4658-201ENST00000584344 65 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AC123912.5-201ENST00000605470 343 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AP001330.5-201ENST00000607176 411 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AC064807.4-201ENST00000607201 407 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 uc_338.34-201ENST00000617467 174 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AL359880.1-201ENST00000621879 266 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 AC010329.5-201ENST00000623497 2174 ntBASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.29□□□□□ -2.04
VIPAS39Q9H9C1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.28□□□□□ -2.04
VIPAS39Q9H9C1 AL596028.1-201ENST00000326971 197 ntBASIC2.28□□□□□ -2.04
VIPAS39Q9H9C1 AC138393.1-203ENST00000327086 343 ntBASIC2.28□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-78P-201ENST00000362897 107 ntBASIC2.28□□□□□ -2.04
VIPAS39Q9H9C1 SNORD56.1-201ENST00000362913 68 ntBASIC2.28□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-525P-201ENST00000363685 104 ntBASIC2.28□□□□□ -2.04
VIPAS39Q9H9C1 RNU5E-7P-201ENST00000365290 117 ntBASIC2.28□□□□□ -2.04
VIPAS39Q9H9C1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VIPAS39Q9H9C1 SNORD116-4-201ENST00000384733 96 ntBASIC2.28□□□□□ -2.04
VIPAS39Q9H9C1 SNORA48.3-201ENST00000391081 134 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms