Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.19□□□□□ -1.9
EBF3Q9H4W6 AC010265.1-201ENST00000513509 211 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 RNU6-470P-201ENST00000515954 104 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 RNU2-69P-201ENST00000516061 100 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 RNU6-635P-201ENST00000516651 102 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 RNU6-1332P-201ENST00000516666 104 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 RNU6-840P-201ENST00000517275 65 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 FAM60BP-201ENST00000578364 658 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 MIR3690-201ENST00000580266 75 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.19□□□□□ -1.9
EBF3Q9H4W6 MIR4506-201ENST00000584693 77 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
EBF3Q9H4W6 AL670379.4-201ENST00000605279 254 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 AC006023.2-201ENST00000609916 167 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 AL360181.4-201ENST00000621752 134 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 AC091903.1-201ENST00000624322 454 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.19□□□□□ -1.9
EBF3Q9H4W6 AC000403.1-201ENST00000613696 3585 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
EBF3Q9H4W6 AL079305.1-201ENST00000623159 3008 ntBASIC3.19□□□□□ -1.9
EBF3Q9H4W6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
EBF3Q9H4W6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
EBF3Q9H4W6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 MIR22-201ENST00000362190 85 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 RNU6-238P-201ENST00000363313 106 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 RNU6-1059P-201ENST00000363752 98 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 Y_RNA.176-201ENST00000363815 109 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 RNU6-173P-201ENST00000364215 104 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 Y_RNA.455-201ENST00000384230 98 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 RNU6-306P-201ENST00000384617 107 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 EEF1A1P41-201ENST00000414667 207 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 AC092809.3-201ENST00000415453 231 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 AC079780.1-201ENST00000428259 207 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 VDAC1P3-201ENST00000434069 851 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 Z98949.2-201ENST00000440996 144 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 CECR9-201ENST00000453421 199 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 AL583843.1-201ENST00000456070 346 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 RNU7-167P-201ENST00000459160 62 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 RPL21P104-201ENST00000464143 478 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 AC010285.1-201ENST00000470580 392 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 HSPE1P6-201ENST00000479457 291 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 RPS4XP13-201ENST00000483219 789 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 Y_RNA.708-201ENST00000516950 96 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 RNU6-1073P-201ENST00000517182 106 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 AC007619.2-201ENST00000605743 379 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
EBF3Q9H4W6 MAPK10-362ENST00000641864 4484 ntBASIC3.18□□□□□ -1.9
EBF3Q9H4W6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 RNU6-379P-201ENST00000363813 104 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 RNU6-450P-201ENST00000364654 107 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 RNU6-393P-201ENST00000384475 107 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AL139039.1-201ENST00000401900 692 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 RN7SKP123-201ENST00000410732 291 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 RNU2-71P-201ENST00000411395 189 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 RPL32P35-201ENST00000415214 394 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 RPL21P66-201ENST00000426566 466 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AC093151.1-201ENST00000427711 313 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 USP9YP30-201ENST00000430729 455 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 RNU6-953P-201ENST00000459154 107 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 MLLT10P2-201ENST00000506434 249 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AC009901.1-201ENST00000506703 541 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 SCARNA16.2-201ENST00000516520 172 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 RNU6-677P-201ENST00000516914 101 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AC005951.2-201ENST00000576282 495 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AL138889.2-201ENST00000603883 242 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 U2.17-201ENST00000611454 95 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AC107871.2-201ENST00000612894 502 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AL359547.2-201ENST00000615810 418 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.17□□□□□ -1.9
EBF3Q9H4W6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
EBF3Q9H4W6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms