Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF39Q9H2S5 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF39Q9H2S5 SNORA1B-201ENST00000362535 133 ntBASIC6.21□□□□□ -1.42
RNF39Q9H2S5 RNU6-1197P-201ENST00000391183 107 ntBASIC6.21□□□□□ -1.42
RNF39Q9H2S5 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF39Q9H2S5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF39Q9H2S5 SNRPGP14-201ENST00000435400 219 ntBASIC6.21□□□□□ -1.42
RNF39Q9H2S5 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF39Q9H2S5 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF39Q9H2S5 AC007225.2-201ENST00000562529 256 ntBASIC6.21□□□□□ -1.42
RNF39Q9H2S5 AC012676.2-201ENST00000619258 186 ntBASIC6.21□□□□□ -1.42
RNF39Q9H2S5 MIR3199-2-201ENST00000636243 86 ntBASIC6.21□□□□□ -1.42
RNF39Q9H2S5 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF39Q9H2S5 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RNF39Q9H2S5 AC010266.2-201ENST00000564741 3255 ntBASIC6.21□□□□□ -1.42
RNF39Q9H2S5 SCARNA15-201ENST00000607520 4325 ntBASIC6.21□□□□□ -1.42
RNF39Q9H2S5 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 MIR206-201ENST00000384872 86 ntBASIC6.2□□□□□ -1.42
RNF39Q9H2S5 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 MIR1178-201ENST00000408396 91 ntBASIC6.2□□□□□ -1.42
RNF39Q9H2S5 AL590139.1-201ENST00000416267 400 ntBASIC6.2□□□□□ -1.42
RNF39Q9H2S5 AC027308.1-201ENST00000517993 110 ntBASIC6.2□□□□□ -1.42
RNF39Q9H2S5 ATP5J2P6-201ENST00000565203 266 ntBASIC6.2□□□□□ -1.42
RNF39Q9H2S5 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF39Q9H2S5 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 RNU6-208P-201ENST00000362431 107 ntBASIC6.19□□□□□ -1.42
RNF39Q9H2S5 SNORA22.1-201ENST00000362701 134 ntBASIC6.19□□□□□ -1.42
RNF39Q9H2S5 AC107083.1-201ENST00000439643 279 ntBASIC6.19□□□□□ -1.42
RNF39Q9H2S5 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 AP004371.1-201ENST00000525240 214 ntBASIC6.19□□□□□ -1.42
RNF39Q9H2S5 AC007536.1-201ENST00000533382 349 ntBASIC6.19□□□□□ -1.42
RNF39Q9H2S5 AC022655.2-201ENST00000577280 318 ntBASIC6.19□□□□□ -1.42
RNF39Q9H2S5 FAM106DP-201ENST00000586416 501 ntBASIC6.19□□□□□ -1.42
RNF39Q9H2S5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF39Q9H2S5 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 AC006504.1-201ENST00000562493 3666 ntBASIC6.18□□□□□ -1.42
RNF39Q9H2S5 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 SNORD38.2-201ENST00000384470 69 ntBASIC6.18□□□□□ -1.42
RNF39Q9H2S5 RNU6-146P-201ENST00000384602 108 ntBASIC6.18□□□□□ -1.42
RNF39Q9H2S5 SNRPGP5-201ENST00000456003 220 ntBASIC6.18□□□□□ -1.42
RNF39Q9H2S5 RNU7-45P-201ENST00000459460 63 ntBASIC6.18□□□□□ -1.42
RNF39Q9H2S5 RN7SL610P-201ENST00000463845 291 ntBASIC6.18□□□□□ -1.42
RNF39Q9H2S5 RNU6-941P-201ENST00000516346 108 ntBASIC6.18□□□□□ -1.42
RNF39Q9H2S5 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 MIR3152-201ENST00000579801 74 ntBASIC6.18□□□□□ -1.42
RNF39Q9H2S5 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 AC096644.4-201ENST00000563417 2912 ntBASIC6.18□□□□□ -1.42
RNF39Q9H2S5 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
RNF39Q9H2S5 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
RNF39Q9H2S5 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 755.1 ms