Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SLIRPQ9GZT3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 RNU6-944P-201ENST00000364023 107 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 SNORA8-201ENST00000384574 139 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 SNORA64-201ENST00000384674 134 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 MIR29B2-201ENST00000385055 81 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 MIR1262-201ENST00000408276 93 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 OR9R1P-201ENST00000412200 877 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 AC104850.1-201ENST00000435940 476 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 AL353752.1-201ENST00000454946 260 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 RPL23AP42-201ENST00000471152 471 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 AC090572.1-201ENST00000519251 160 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 AL670379.2-201ENST00000604983 252 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 AL670379.4-201ENST00000605279 254 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 AC092354.1-201ENST00000606057 376 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 AC108479.2-201ENST00000617314 601 ntBASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SLIRPQ9GZT3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AL136360.1-201ENST00000503377 1900 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 RNU6-212P-201ENST00000362642 104 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 RNU6-78P-201ENST00000362897 107 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 SNORD56.1-201ENST00000362913 68 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 U8.3-201ENST00000363321 132 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 Y_RNA.576-201ENST00000384781 102 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 MIR676-201ENST00000390702 67 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 RNA5SP465-201ENST00000391195 109 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AL079342.1-201ENST00000401460 267 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 RNU2-3P-201ENST00000410144 191 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 RN7SKP284-201ENST00000411002 343 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 RNU6-607P-201ENST00000411283 108 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AC244636.1-201ENST00000421152 228 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 TOMM20P4-201ENST00000427861 435 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AC000111.3-201ENST00000433478 193 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AC007969.2-201ENST00000441891 191 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 RPL23AP6-201ENST00000446637 472 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 SNRPFP4-201ENST00000456366 242 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 RPL30P1-201ENST00000488676 339 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 MTND3P25-201ENST00000509243 135 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 MTND1P22-201ENST00000510572 951 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 Vault.3-201ENST00000516676 95 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AC106038.2-201ENST00000520706 568 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 OR5AL2P-201ENST00000532185 920 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AC073539.2-201ENST00000597113 165 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AL136363.2-201ENST00000604173 851 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AC091834.1-201ENST00000614543 472 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AC131159.1-201ENST00000621854 213 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 AL391262.2-201ENST00000622466 494 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 MIR219B-201ENST00000637023 88 ntBASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SLIRPQ9GZT3 MTND5P17-201ENST00000418405 1603 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 ZNF355P-201ENST00000427301 3216 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 SNORD115-7-201ENST00000365306 82 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 RNU5A-2P-201ENST00000384337 116 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 RNU4-53P-201ENST00000410828 140 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 Z92545.1-201ENST00000411782 234 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 SRIP3-201ENST00000413200 219 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 MTND4P20-201ENST00000424125 869 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AC073614.1-201ENST00000438690 650 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AL360221.1-201ENST00000445989 335 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AC245102.2-201ENST00000448956 180 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 ANXA2P1-201ENST00000505539 926 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 PTP4A1P4-201ENST00000512479 322 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AP005639.2-201ENST00000527592 928 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 MIR3162-201ENST00000581818 82 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AL133173.2-201ENST00000614270 90 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AC005296.1-201ENST00000616145 209 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AC079248.2-201ENST00000623779 326 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 AC243829.7-201ENST00000633081 225 ntBASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.48□□□□□ -2.17
SLIRPQ9GZT3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms