Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNU6-944P-201ENST00000364023 107 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 RNU6-743P-201ENST00000364151 106 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 RNU6-1164P-201ENST00000364428 107 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AC068050.1-201ENST00000394891 380 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AC009310.1-201ENST00000414414 451 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 RPL37P21-201ENST00000435890 276 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 HSPE1P24-201ENST00000450782 238 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 RNU1-98P-201ENST00000458992 160 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 SNORD13-201ENST00000459299 104 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 snoU13.14-201ENST00000459372 104 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AC112206.3-201ENST00000514578 389 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AC022616.6-201ENST00000520479 119 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 ADI1P3-201ENST00000549509 470 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AL354943.1-201ENST00000572103 781 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 MIR3118-1-201ENST00000581787 76 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 MIR548AC-201ENST00000585049 88 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AL353778.1-201ENST00000603149 408 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AP000942.3-201ENST00000603702 160 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AC105148.1-201ENST00000604961 409 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 AL607023.1-201ENST00000620045 248 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 SCARNA4-202ENST00000625402 129 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 WWP1P1-201ENST00000466609 2769 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
UPK3BQ9BT76 OR4G2P-201ENST00000328113 903 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 Y_RNA.40-201ENST00000362645 93 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 SNORD3E-201ENST00000362899 217 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 RNU6-906P-201ENST00000384700 70 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 RPS3AP36-201ENST00000398190 775 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 RNU6-955P-201ENST00000410497 104 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.12□□□□□ -2.23
UPK3BQ9BT76 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.12□□□□□ -2.23
UPK3BQ9BT76 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.12□□□□□ -2.23
UPK3BQ9BT76 MTND1P12-201ENST00000455231 147 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.12□□□□□ -2.23
UPK3BQ9BT76 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 AC018630.3-201ENST00000542637 96 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 MIR3198-2-201ENST00000577868 80 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 AP001004.1-201ENST00000582468 324 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 AP002360.4-201ENST00000606980 481 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.12□□□□□ -2.23
UPK3BQ9BT76 MIR8081-201ENST00000611533 95 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 AL139418.1-201ENST00000613613 177 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 AP000720.1-201ENST00000625091 483 ntBASIC1.12□□□□□ -2.23
UPK3BQ9BT76 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
UPK3BQ9BT76 AC233981.2-201ENST00000611524 1614 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 MTND5P10-201ENST00000603719 1809 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 snoU2_19.1-201ENST00000362361 80 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 SNORD56.2-201ENST00000363242 71 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 SNORD14B-201ENST00000364533 90 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 RNU6-1179P-201ENST00000384667 107 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 MIR30A-201ENST00000385092 71 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AC137499.1-201ENST00000427602 88 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 MTND1P32-201ENST00000433043 938 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AL353752.1-201ENST00000454946 260 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.11□□□□□ -2.23
UPK3BQ9BT76 RPL30P6-201ENST00000475925 342 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AP000797.1-201ENST00000478870 387 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 FAM206BP-201ENST00000510179 541 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.11□□□□□ -2.23
UPK3BQ9BT76 Y_RNA.687-201ENST00000516558 91 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 MTND4LP18-201ENST00000526864 291 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AP005435.4-201ENST00000529514 284 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.11□□□□□ -2.23
UPK3BQ9BT76 BNIP3P6-201ENST00000549284 499 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UPK3BQ9BT76 SNORD53B-201ENST00000577887 78 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.11□□□□□ -2.23
UPK3BQ9BT76 DEFB131E-202ENST00000602581 683 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AC091304.6-201ENST00000619761 202 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.11□□□□□ -2.23
UPK3BQ9BT76 AC006927.4-201ENST00000639187 543 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 MTND4P9-201ENST00000507819 1346 ntBASIC1.11□□□□□ -2.23
UPK3BQ9BT76 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
UPK3BQ9BT76 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
UPK3BQ9BT76 AC006026.1-201ENST00000444025 1803 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 SNORD56.1-201ENST00000362913 68 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 Y_RNA.99-201ENST00000363138 105 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 RNU6-809P-201ENST00000384461 107 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms