Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNU4-40P-201ENST00000364351 143 ntBASIC2.24□□□□□ -2.05
SSX3Q99909 Y_RNA.255-201ENST00000364581 97 ntBASIC2.24□□□□□ -2.05
SSX3Q99909 RNU6-487P-201ENST00000365430 104 ntBASIC2.24□□□□□ -2.05
SSX3Q99909 Y_RNA.480-201ENST00000384364 102 ntBASIC2.24□□□□□ -2.05
SSX3Q99909 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SSX3Q99909 RNA5SP184-201ENST00000411071 108 ntBASIC2.24□□□□□ -2.05
SSX3Q99909 OR9R1P-201ENST00000412200 877 ntBASIC2.24□□□□□ -2.05
SSX3Q99909 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.24□□□□□ -2.05
SSX3Q99909 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.24□□□□□ -2.05
SSX3Q99909 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.24□□□□□ -2.05
SSX3Q99909 AC073415.1-201ENST00000449240 153 ntBASIC2.24□□□□□ -2.05
SSX3Q99909 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.24□□□□□ -2.05
SSX3Q99909 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.24□□□□□ -2.05
SSX3Q99909 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.24□□□□□ -2.05
SSX3Q99909 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.24□□□□□ -2.05
SSX3Q99909 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.24□□□□□ -2.05
SSX3Q99909 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.24□□□□□ -2.05
SSX3Q99909 ZNF861P-201ENST00000588126 639 ntBASIC2.24□□□□□ -2.05
SSX3Q99909 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.24□□□□□ -2.05
SSX3Q99909 AL121917.1-203ENST00000605534 577 ntBASIC2.24□□□□□ -2.05
SSX3Q99909 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
SSX3Q99909 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.24□□□□□ -2.05
SSX3Q99909 RMST_7.1-201ENST00000621935 268 ntBASIC2.24□□□□□ -2.05
SSX3Q99909 Z69720.2-201ENST00000624755 279 ntBASIC2.24□□□□□ -2.05
SSX3Q99909 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.24□□□□□ -2.05
SSX3Q99909 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SSX3Q99909 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.24□□□□□ -2.05
SSX3Q99909 AC092593.1-201ENST00000515413 1815 ntBASIC2.24□□□□□ -2.05
SSX3Q99909 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
SSX3Q99909 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
SSX3Q99909 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.24□□□□□ -2.05
SSX3Q99909 Y_RNA.409-201ENST00000383990 98 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AL138827.1-201ENST00000402666 306 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AL606923.1-201ENST00000406616 190 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 RNU6-1140P-201ENST00000410517 106 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AC074117.2-201ENST00000417130 397 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.23□□□□□ -2.05
SSX3Q99909 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.23□□□□□ -2.05
SSX3Q99909 AC063976.3-201ENST00000426849 329 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 DLGAP5P1-201ENST00000430307 464 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 RPL7P54-201ENST00000438336 674 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.23□□□□□ -2.05
SSX3Q99909 CACYBPP2-201ENST00000453625 678 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 UBE2DNL-203ENST00000474922 222 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AC079140.5-201ENST00000507882 310 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.23□□□□□ -2.05
SSX3Q99909 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.23□□□□□ -2.05
SSX3Q99909 SNORA31.23-201ENST00000517219 133 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AC118273.2-201ENST00000532092 465 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AC136619.2-201ENST00000563361 631 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AC105137.2-201ENST00000569073 466 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 MIR4319-201ENST00000577285 85 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AC103987.3-201ENST00000582071 292 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AC006023.1-201ENST00000603944 259 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AP001330.5-201ENST00000607176 411 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AC005046.1-201ENST00000608515 625 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AL137847.3-201ENST00000611521 109 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 U4atac.1-201ENST00000618345 95 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AC124864.2-201ENST00000624736 186 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SSX3Q99909 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.23□□□□□ -2.05
SSX3Q99909 AL354685.2-201ENST00000448218 1447 ntBASIC2.23□□□□□ -2.05
SSX3Q99909 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SSX3Q99909 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-37P-201ENST00000362692 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 SNORD56.1-201ENST00000362913 68 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-11P-201ENST00000364234 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU4-75P-201ENST00000364621 146 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 SNORA16B-201ENST00000364674 135 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-25P-201ENST00000383873 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-1-201ENST00000383898 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-48P-201ENST00000384161 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-36P-201ENST00000384172 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-4P-201ENST00000384205 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-5P-201ENST00000384238 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-622P-201ENST00000384272 103 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-3P-201ENST00000384314 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 Y_RNA.481-201ENST00000384373 102 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-16P-201ENST00000384385 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-15P-201ENST00000384534 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-2-201ENST00000384627 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-29P-201ENST00000384637 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-9-201ENST00000384776 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU6-33P-201ENST00000384793 107 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 MIR196B-201ENST00000384852 84 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNA5SP210-201ENST00000391034 120 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.22□□□□□ -2.05
SSX3Q99909 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.22□□□□□ -2.05
SSX3Q99909 RPS12P2-201ENST00000439728 269 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 MTCO2P7-201ENST00000446518 666 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.22□□□□□ -2.05
SSX3Q99909 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.22□□□□□ -2.05
SSX3Q99909 SNORD109B-201ENST00000458961 67 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 SNORD109A-201ENST00000459128 67 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 SRRM1P2-201ENST00000464531 1192 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RPL9P6-201ENST00000492764 598 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RPL23AP49-201ENST00000492925 468 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 SNORA40.12-201ENST00000516329 111 ntBASIC2.22□□□□□ -2.05
SSX3Q99909 MTND4P7-201ENST00000523876 130 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms