Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 EDDM3CP-201ENST00000415977 425 ntBASIC-0.61□□□□□ -2.51
VPS13AQ96RL7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.61□□□□□ -2.51
VPS13AQ96RL7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC-0.61□□□□□ -2.51
VPS13AQ96RL7 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.61□□□□□ -2.51
VPS13AQ96RL7 OR10V3P-201ENST00000525712 725 ntBASIC-0.61□□□□□ -2.51
VPS13AQ96RL7 AP003034.1-201ENST00000534621 422 ntBASIC-0.61□□□□□ -2.51
VPS13AQ96RL7 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.61□□□□□ -2.51
VPS13AQ96RL7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
VPS13AQ96RL7 U3.20-201ENST00000390909 217 ntBASIC-0.62□□□□□ -2.51
VPS13AQ96RL7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.62□□□□□ -2.51
VPS13AQ96RL7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.62□□□□□ -2.51
VPS13AQ96RL7 AC105029.1-201ENST00000520250 669 ntBASIC-0.62□□□□□ -2.51
VPS13AQ96RL7 AC040926.1-201ENST00000530195 238 ntBASIC-0.62□□□□□ -2.51
VPS13AQ96RL7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.62□□□□□ -2.51
VPS13AQ96RL7 RNY1P7-201ENST00000384743 110 ntBASIC-0.62□□□□□ -2.51
VPS13AQ96RL7 MIR218-1-201ENST00000384999 110 ntBASIC-0.62□□□□□ -2.51
VPS13AQ96RL7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.62□□□□□ -2.51
VPS13AQ96RL7 RNU6-1334P-201ENST00000516032 105 ntBASIC-0.62□□□□□ -2.51
VPS13AQ96RL7 AC112187.2-201ENST00000604345 283 ntBASIC-0.62□□□□□ -2.51
VPS13AQ96RL7 AL391099.1-201ENST00000624635 187 ntBASIC-0.62□□□□□ -2.51
VPS13AQ96RL7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 SNORA40.19-201ENST00000390846 128 ntBASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 AC060771.1-201ENST00000582031 164 ntBASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 BX284668.6-201ENST00000606899 438 ntBASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 MTND5P33-201ENST00000571250 1450 ntBASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 RNU6-858P-201ENST00000362436 107 ntBASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 MIR145-201ENST00000384967 88 ntBASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 AC239798.3-201ENST00000454459 408 ntBASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 AC091021.1-201ENST00000468051 388 ntBASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 AC087879.1-201ENST00000474343 374 ntBASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 AC105758.1-201ENST00000506038 399 ntBASIC-0.63□□□□□ -2.51
VPS13AQ96RL7 RNU4-16P-201ENST00000364737 141 ntBASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 ZNF736P11Y-201ENST00000442535 1213 ntBASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 NRON-201ENST00000517270 370 ntBASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 CYCSP27-201ENST00000527643 293 ntBASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 AC011921.3-201ENST00000605540 361 ntBASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 MIR518D-201ENST00000385014 87 ntBASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 AC092809.3-201ENST00000415453 231 ntBASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 CYP3A52P-201ENST00000563326 91 ntBASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 COX6CP3-201ENST00000580869 223 ntBASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC-0.64□□□□□ -2.51
VPS13AQ96RL7 SNORA68.1-201ENST00000364537 132 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 RPF2P2-201ENST00000504693 896 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 RNU6-287P-201ENST00000516230 98 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 HAUS1P3-201ENST00000523909 662 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 AC084824.4-201ENST00000620106 731 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 AL390237.1-201ENST00000404226 1415 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 SNORD114-24-201ENST00000365029 72 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 SNORA75.2-201ENST00000391138 150 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 HMGN2P39-201ENST00000398005 273 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 AC007435.1-201ENST00000421086 415 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 AC027119.1-201ENST00000440877 241 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 RAB11AP1-201ENST00000442978 646 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 snoU109.2-201ENST00000459316 135 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 AC004923.2-201ENST00000529649 369 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 AC024257.5-201ENST00000612739 531 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 MIR8074-201ENST00000615081 81 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 MIR610-201ENST00000385139 96 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 AC022447.1-201ENST00000515358 464 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 AC022690.1-201ENST00000526681 550 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 AL662814.1-201ENST00000617364 121 ntBASIC-0.65□□□□□ -2.51
VPS13AQ96RL7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.66□□□□□ -2.51
VPS13AQ96RL7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.66□□□□□ -2.51
VPS13AQ96RL7 AP001324.2-201ENST00000461163 319 ntBASIC-0.66□□□□□ -2.51
VPS13AQ96RL7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.66□□□□□ -2.51
VPS13AQ96RL7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.66□□□□□ -2.51
VPS13AQ96RL7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.66□□□□□ -2.51
VPS13AQ96RL7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC-0.66□□□□□ -2.51
VPS13AQ96RL7 MIR95-201ENST00000385072 81 ntBASIC-0.66□□□□□ -2.52
VPS13AQ96RL7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.66□□□□□ -2.52
VPS13AQ96RL7 RNA5SP168-201ENST00000516642 112 ntBASIC-0.66□□□□□ -2.52
VPS13AQ96RL7 AC069113.3-201ENST00000521019 150 ntBASIC-0.66□□□□□ -2.52
VPS13AQ96RL7 AC023442.1-201ENST00000531247 422 ntBASIC-0.66□□□□□ -2.52
VPS13AQ96RL7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.67□□□□□ -2.52
VPS13AQ96RL7 RNU6-284P-201ENST00000411105 106 ntBASIC-0.67□□□□□ -2.52
VPS13AQ96RL7 MTND1P9-201ENST00000453775 944 ntBASIC-0.67□□□□□ -2.52
VPS13AQ96RL7 RNU1-131P-201ENST00000458943 161 ntBASIC-0.67□□□□□ -2.52
VPS13AQ96RL7 CYB5AP5-201ENST00000549779 389 ntBASIC-0.67□□□□□ -2.52
VPS13AQ96RL7 AC010376.1-201ENST00000522101 334 ntBASIC-0.67□□□□□ -2.52
VPS13AQ96RL7 CR848007.1-201ENST00000442354 1699 ntBASIC-0.67□□□□□ -2.52
VPS13AQ96RL7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
VPS13AQ96RL7 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms