Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC097372.5-201ENST00000623665 376 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 AC090617.10-201ENST00000624308 134 ntBASIC2.75□□□□□ -1.97
NR1H4Q96RI1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.75□□□□□ -1.97
NR1H4Q96RI1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.75□□□□□ -1.97
NR1H4Q96RI1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC073325.2-201ENST00000339545 159 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 RNU6-428P-201ENST00000362942 107 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 RNU6-336P-201ENST00000364891 107 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 RNU1-57P-201ENST00000384491 166 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 SNORD73A-201ENST00000386062 65 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 U6atac.2-201ENST00000408644 118 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 RNU2-25P-201ENST00000411041 191 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.74□□□□□ -1.97
NR1H4Q96RI1 CR769767.1-201ENST00000436337 346 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AL445687.1-201ENST00000439946 251 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC013470.1-201ENST00000453438 462 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 RNU6-1037P-201ENST00000459571 107 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 RPL31P58-201ENST00000469001 379 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AP001025.1-201ENST00000486139 332 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC097462.2-201ENST00000504623 481 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 FAM206BP-201ENST00000510179 541 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC026403.1-201ENST00000518938 295 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AF235103.2-201ENST00000525753 346 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC011611.1-201ENST00000552179 197 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC103996.1-201ENST00000555468 102 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC027176.1-201ENST00000560204 514 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.74□□□□□ -1.97
NR1H4Q96RI1 MIR3605-201ENST00000583214 100 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 VN1R107P-201ENST00000601784 209 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC007318.2-201ENST00000620999 243 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC006504.8-201ENST00000621046 635 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC039056.2-201ENST00000622261 511 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.74□□□□□ -1.97
NR1H4Q96RI1 AC012442.3-202ENST00000636742 206 ntBASIC2.74□□□□□ -1.97
NR1H4Q96RI1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NR1H4Q96RI1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.74□□□□□ -1.97
NR1H4Q96RI1 ZNF271P-202ENST00000465539 1970 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 RNU6-254P-201ENST00000363377 107 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 RNU1-140P-201ENST00000365040 165 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 SNORA62.3-201ENST00000365110 153 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 Y_RNA.414-201ENST00000384011 101 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 MIR200C-201ENST00000384980 68 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 NUP35P1-201ENST00000422734 947 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 RPL30P4-201ENST00000429309 333 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 SUMO1P4-201ENST00000429430 302 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 MTND1P2-201ENST00000430604 821 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 MTCO2P3-201ENST00000442543 421 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 RNU6-358P-201ENST00000516564 75 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 RNU6-1332P-201ENST00000516666 104 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 AP005597.4-201ENST00000526762 229 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 AC007458.1-201ENST00000542812 373 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 PSMA3P-201ENST00000555485 635 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 BNIP3P10-201ENST00000605360 577 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 AC068944.2-201ENST00000610373 403 ntBASIC2.73□□□□□ -1.97
NR1H4Q96RI1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.73□□□□□ -1.97
NR1H4Q96RI1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 RNU6-212P-201ENST00000362642 104 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 RNU6-1252P-201ENST00000363054 104 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 RNU6-1329P-201ENST00000365664 107 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 SNORA32.2-201ENST00000384049 122 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 RNU6-1013P-201ENST00000384180 107 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 MIR544A-201ENST00000384855 91 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 MIR490-201ENST00000384865 128 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 MIR512-1-201ENST00000384913 84 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 RNU2-23P-201ENST00000410545 195 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 UBE2V1P4-201ENST00000425374 344 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AC122718.1-201ENST00000439448 744 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AC080013.2-201ENST00000460866 323 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms