Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 RNU6-415P-201ENST00000516252 97 ntBASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 RNU5A-4P-201ENST00000516588 111 ntBASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 AP003122.4-201ENST00000530980 758 ntBASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 BNIP3P10-201ENST00000605360 577 ntBASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 AC012360.2-201ENST00000609349 391 ntBASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 Z82243.1-201ENST00000609432 473 ntBASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 AL359547.2-201ENST00000615810 418 ntBASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 U6.42-201ENST00000618440 107 ntBASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 AL607023.1-201ENST00000620045 248 ntBASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 AC093648.1-201ENST00000623546 606 ntBASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 AC092192.1-201ENST00000633154 1018 ntBASIC1.59□□□□□ -2.15
CSPG4P5Q96PW8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 FARSBP1-201ENST00000435808 1778 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 RNU6-1200P-201ENST00000384162 107 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 SNORD14D-201ENST00000384390 87 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 SNORD116-20-201ENST00000384529 92 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 MIR10A-201ENST00000385043 110 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 VN1R36P-201ENST00000414936 291 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 RPS15AP12-201ENST00000419498 388 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 EIF4EP2-201ENST00000422816 654 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 NDUFB1P2-201ENST00000449477 176 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 PTP4A1P4-201ENST00000512479 322 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 RNA5SP458-201ENST00000516188 119 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 RNU7-51P-201ENST00000516560 62 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 RN7SKP219-201ENST00000516825 296 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 AC022616.6-201ENST00000520479 119 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 AP005660.1-201ENST00000522972 293 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 AC018714.1-201ENST00000605028 208 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 AL158032.1-201ENST00000605401 106 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 AL132822.1-201ENST00000617063 513 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 U1.36-201ENST00000620684 176 ntBASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CSPG4P5Q96PW8 SNORD3E-201ENST00000362899 217 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 Y_RNA.97-201ENST00000363094 102 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 U8.3-201ENST00000363321 132 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 RNU6-1210P-201ENST00000363775 107 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 RNA5SP99-201ENST00000364020 114 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 MIR320A-201ENST00000385302 82 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 CBX3P9-201ENST00000402326 552 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 RNU2-23P-201ENST00000410545 195 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 UBE2V1P4-201ENST00000425374 344 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 CALM1P1-201ENST00000442082 433 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 Y_RNA.638-201ENST00000459374 113 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AP001025.1-201ENST00000486139 332 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AC096745.1-201ENST00000509945 370 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AC112206.3-201ENST00000514578 389 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AC117532.1-201ENST00000514638 323 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 RNU6-991P-201ENST00000516168 107 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 RNU6-311P-201ENST00000516224 102 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AC022616.8-201ENST00000533569 253 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AC022254.1-201ENST00000567857 235 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 MIR3118-1-201ENST00000581787 76 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AP001004.1-201ENST00000582468 324 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 MIR4999-201ENST00000585029 91 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AC012065.4-201ENST00000602445 679 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AL138889.2-201ENST00000603883 242 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 AC105148.1-201ENST00000604961 409 ntBASIC1.57□□□□□ -2.16
CSPG4P5Q96PW8 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 Y_RNA.18-201ENST00000362461 102 ntBASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 AL033519.2-201ENST00000403958 392 ntBASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 RNA5SP390-201ENST00000410191 113 ntBASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 SRIP3-201ENST00000413200 219 ntBASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 USP9YP18-201ENST00000425912 695 ntBASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 RPL37P21-201ENST00000435890 276 ntBASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 GDI2P2-201ENST00000445131 608 ntBASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 MTND1P12-201ENST00000455231 147 ntBASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 AC027575.1-201ENST00000481064 460 ntBASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 TPT1P8-201ENST00000510120 555 ntBASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.56□□□□□ -2.16
CSPG4P5Q96PW8 RN7SKP256-201ENST00000517201 314 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms