Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ELOCP30-201ENST00000447108 299 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 AC132479.1-201ENST00000449160 144 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 snoU13.23-201ENST00000458863 104 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 COX6CP14-201ENST00000469580 174 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.57□□□□□ -2.32
AP1S3Q96PC3 AC074344.1-201ENST00000512823 224 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.57□□□□□ -2.32
AP1S3Q96PC3 VN1R83P-201ENST00000595685 445 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 VN1R80P-201ENST00000597126 338 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 BNIP3P30-201ENST00000601184 574 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 AL358072.1-201ENST00000604156 575 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.57□□□□□ -2.32
AP1S3Q96PC3 AC040896.1-201ENST00000613819 479 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 AC112204.3-201ENST00000623822 332 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.57□□□□□ -2.32
AP1S3Q96PC3 MIR340-201ENST00000362125 95 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 SNORA75B-201ENST00000384053 137 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 MIR19B1-201ENST00000384829 87 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 MIR19A-201ENST00000384878 82 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 RNU11-5P-201ENST00000391216 129 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 Y_RNA.597-201ENST00000410463 100 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 AC009518.2-201ENST00000418056 731 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.56□□□□□ -2.32
AP1S3Q96PC3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.56□□□□□ -2.32
AP1S3Q96PC3 MTCO1P3-201ENST00000429327 192 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 FTH1P12-201ENST00000432137 551 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.56□□□□□ -2.32
AP1S3Q96PC3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.56□□□□□ -2.32
AP1S3Q96PC3 MTND4P6-201ENST00000438297 472 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
AP1S3Q96PC3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.56□□□□□ -2.32
AP1S3Q96PC3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.56□□□□□ -2.32
AP1S3Q96PC3 RNU6-197P-201ENST00000516680 100 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 RNU6-64P-201ENST00000517119 105 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
AP1S3Q96PC3 MTCO3P15-201ENST00000526563 574 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.56□□□□□ -2.32
AP1S3Q96PC3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.56□□□□□ -2.32
AP1S3Q96PC3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.56□□□□□ -2.32
AP1S3Q96PC3 AC108706.1-201ENST00000611053 297 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.56□□□□□ -2.32
AP1S3Q96PC3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.56□□□□□ -2.32
AP1S3Q96PC3 AC097460.3-201ENST00000623099 442 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 AC091895.1-201ENST00000624494 256 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 AC245060.5-201ENST00000610778 3293 ntBASIC0.56□□□□□ -2.32
AP1S3Q96PC3 RNU6-289P-201ENST00000364093 107 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 RNU6-777P-201ENST00000364265 104 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 RNU6-1122P-201ENST00000384449 107 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 MIR194-1-201ENST00000384892 85 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
AP1S3Q96PC3 USP9YP33-201ENST00000412220 421 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
AP1S3Q96PC3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.55□□□□□ -2.32
AP1S3Q96PC3 AC114482.1-201ENST00000418010 247 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 RAC1P6-201ENST00000423911 575 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.55□□□□□ -2.32
AP1S3Q96PC3 AL078601.1-201ENST00000444542 271 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 HSPE1P13-201ENST00000451143 297 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 RN7SL429P-201ENST00000479090 223 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 AL163540.1-201ENST00000485382 386 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 RN7SL489P-201ENST00000486185 223 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 RN7SL327P-201ENST00000488659 223 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 RPL39P36-201ENST00000490784 156 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 RNU6-150P-201ENST00000516237 95 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 RN7SKP219-201ENST00000516825 296 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.55□□□□□ -2.32
AP1S3Q96PC3 AC004817.2-201ENST00000561794 651 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.55□□□□□ -2.32
AP1S3Q96PC3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.55□□□□□ -2.32
AP1S3Q96PC3 RN7SL853P-201ENST00000617250 223 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.55□□□□□ -2.32
AP1S3Q96PC3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
AP1S3Q96PC3 MTND4P21-201ENST00000453886 1357 ntBASIC0.55□□□□□ -2.32
AP1S3Q96PC3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.55□□□□□ -2.32
AP1S3Q96PC3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.54□□□□□ -2.32
AP1S3Q96PC3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
AP1S3Q96PC3 RNU6-1210P-201ENST00000363775 107 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 RNU6-701P-201ENST00000384059 107 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 FCF1P10-201ENST00000407590 479 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
AP1S3Q96PC3 MTCO3P43-201ENST00000440974 771 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.54□□□□□ -2.32
AP1S3Q96PC3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.54□□□□□ -2.32
AP1S3Q96PC3 RNA5SP269-201ENST00000459032 137 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.54□□□□□ -2.32
AP1S3Q96PC3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.54□□□□□ -2.32
AP1S3Q96PC3 AL163195.1-201ENST00000496941 348 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 AC097473.1-201ENST00000508142 408 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.54□□□□□ -2.32
AP1S3Q96PC3 RNU6-1225P-201ENST00000516336 65 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 AC136628.3-201ENST00000521868 290 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.54□□□□□ -2.32
AP1S3Q96PC3 MIR5708-201ENST00000579723 85 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 AC098848.2-201ENST00000588023 330 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 AC007363.1-201ENST00000604736 620 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 RPL21P136-201ENST00000605378 396 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 AC080078.3-201ENST00000605407 463 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms