Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC-0.3□□□□□ -2.46
CFAP54Q96N23 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.3□□□□□ -2.46
CFAP54Q96N23 AC048346.1-201ENST00000510247 144 ntBASIC-0.3□□□□□ -2.46
CFAP54Q96N23 RNA5SP180-201ENST00000516181 101 ntBASIC-0.3□□□□□ -2.46
CFAP54Q96N23 SNORA31.22-201ENST00000517204 135 ntBASIC-0.3□□□□□ -2.46
CFAP54Q96N23 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.3□□□□□ -2.46
CFAP54Q96N23 AL590240.4-201ENST00000616908 390 ntBASIC-0.3□□□□□ -2.46
CFAP54Q96N23 AC095031.1-201ENST00000623685 672 ntBASIC-0.3□□□□□ -2.46
CFAP54Q96N23 MTND5P30-201ENST00000452896 1731 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 MIR200A-201ENST00000384875 90 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.31□□□□□ -2.46
CFAP54Q96N23 RPS29P15-201ENST00000458329 171 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 AC004062.1-201ENST00000509926 645 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 AC025465.3-201ENST00000510570 311 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 RNA5SP461-201ENST00000516451 104 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 AP001328.1-201ENST00000528550 176 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 AC004584.2-201ENST00000570407 410 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 MIR3609-201ENST00000582661 80 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 MIR4324-201ENST00000584846 72 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 AC024257.5-201ENST00000612739 531 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 AC110792.3-201ENST00000595906 1614 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 RNU2-7P-201ENST00000410794 178 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 RPS27P16-201ENST00000425758 201 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC-0.31□□□□□ -2.46
CFAP54Q96N23 RNA5SP168-201ENST00000516642 112 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC-0.31□□□□□ -2.46
CFAP54Q96N23 AC090079.2-201ENST00000575289 768 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 AC018462.2-201ENST00000605375 395 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 AC004241.3-201ENST00000611728 517 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 AC093838.1-201ENST00000613014 469 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 FTX_2.1-201ENST00000618816 94 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 MIR1295B-201ENST00000636144 60 ntBASIC-0.31□□□□□ -2.46
CFAP54Q96N23 MIR140-201ENST00000385282 100 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 SNORD12-201ENST00000391002 90 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.32□□□□□ -2.46
CFAP54Q96N23 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC-0.32□□□□□ -2.46
CFAP54Q96N23 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC-0.32□□□□□ -2.46
CFAP54Q96N23 HMGN1P12-201ENST00000499125 195 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.32□□□□□ -2.46
CFAP54Q96N23 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.32□□□□□ -2.46
CFAP54Q96N23 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.32□□□□□ -2.46
CFAP54Q96N23 AL133370.2-201ENST00000619934 439 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 AC068647.2-201ENST00000637380 353 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 AL049737.1-201ENST00000413920 1403 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 SNORA42.1-201ENST00000363515 137 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 RNU6-439P-201ENST00000384188 106 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 RPS24P7-201ENST00000416921 246 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 AC138623.1-201ENST00000418060 216 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 AC132479.1-201ENST00000449160 144 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 RNU7-157P-201ENST00000459600 66 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 AC105758.1-201ENST00000506038 399 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC-0.32□□□□□ -2.46
CFAP54Q96N23 SNORA1.1-201ENST00000364671 133 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 RNU6-735P-201ENST00000410612 107 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 RN7SKP88-201ENST00000516847 250 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.32□□□□□ -2.46
CFAP54Q96N23 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.32□□□□□ -2.46
CFAP54Q96N23 SNRPGP20-201ENST00000604477 205 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 7SK.8-201ENST00000612110 250 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
CFAP54Q96N23 7SK.11-201ENST00000615477 250 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 USP12-203ENST00000620323 349 ntTSL 3 BASIC-0.32□□□□□ -2.46
CFAP54Q96N23 7SK.13-201ENST00000622040 250 ntBASIC-0.32□□□□□ -2.46
CFAP54Q96N23 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 RNU6-546P-201ENST00000383991 107 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 MTCO1P44-201ENST00000441935 243 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 RNU6-158P-201ENST00000517104 100 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 OR8K2P-201ENST00000524645 927 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.33□□□□□ -2.46
CFAP54Q96N23 AL356157.2-201ENST00000605122 111 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
CFAP54Q96N23 RNU6-40P-201ENST00000384254 107 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 RNA5SP109-201ENST00000391010 116 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 U6atac.2-201ENST00000408644 118 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 RPS15AP9-201ENST00000439856 381 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC-0.33□□□□□ -2.46
CFAP54Q96N23 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.33□□□□□ -2.46
CFAP54Q96N23 SCARNA17-201ENST00000516183 144 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 AC010900.2-201ENST00000604508 210 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 BX284668.6-201ENST00000606899 438 ntBASIC-0.33□□□□□ -2.46
CFAP54Q96N23 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.34□□□□□ -2.46
CFAP54Q96N23 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
CFAP54Q96N23 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.34□□□□□ -2.46
CFAP54Q96N23 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC-0.34□□□□□ -2.46
CFAP54Q96N23 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.34□□□□□ -2.46
CFAP54Q96N23 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.34□□□□□ -2.46
CFAP54Q96N23 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
CFAP54Q96N23 AC004009.2-201ENST00000623016 728 ntBASIC-0.34□□□□□ -2.46
CFAP54Q96N23 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.34□□□□□ -2.46
CFAP54Q96N23 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.34□□□□□ -2.46
CFAP54Q96N23 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.34□□□□□ -2.46
CFAP54Q96N23 MIR942-201ENST00000401111 86 ntBASIC-0.34□□□□□ -2.46
CFAP54Q96N23 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.34□□□□□ -2.46
CFAP54Q96N23 AP002453.2-201ENST00000533503 320 ntBASIC-0.34□□□□□ -2.46
CFAP54Q96N23 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.34□□□□□ -2.46
CFAP54Q96N23 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms