Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SNRPGP8-201ENST00000454064 226 ntBASIC5.14□□□□□ -1.59
LRCH3Q96II8 ENPP7P11-201ENST00000505915 627 ntBASIC5.14□□□□□ -1.59
LRCH3Q96II8 AC091868.1-201ENST00000508746 304 ntBASIC5.14□□□□□ -1.59
LRCH3Q96II8 SNORA31.16-201ENST00000516773 139 ntBASIC5.14□□□□□ -1.59
LRCH3Q96II8 MED28P6-201ENST00000558776 231 ntBASIC5.14□□□□□ -1.59
LRCH3Q96II8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.14□□□□□ -1.59
LRCH3Q96II8 AC053481.4-201ENST00000583164 216 ntBASIC5.14□□□□□ -1.59
LRCH3Q96II8 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.14□□□□□ -1.59
LRCH3Q96II8 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.14□□□□□ -1.59
LRCH3Q96II8 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.14□□□□□ -1.59
LRCH3Q96II8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.14□□□□□ -1.59
LRCH3Q96II8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRCH3Q96II8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRCH3Q96II8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRCH3Q96II8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRCH3Q96II8 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRCH3Q96II8 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.13□□□□□ -1.59
LRCH3Q96II8 Y_RNA.281-201ENST00000364774 94 ntBASIC5.13□□□□□ -1.59
LRCH3Q96II8 RNU6-1107P-201ENST00000364817 104 ntBASIC5.13□□□□□ -1.59
LRCH3Q96II8 RNU1-100P-201ENST00000365255 165 ntBASIC5.13□□□□□ -1.59
LRCH3Q96II8 MIR449B-201ENST00000384995 97 ntBASIC5.13□□□□□ -1.59
LRCH3Q96II8 EDDM3CP-201ENST00000415977 425 ntBASIC5.13□□□□□ -1.59
LRCH3Q96II8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC5.13□□□□□ -1.59
LRCH3Q96II8 Y_RNA.690-201ENST00000516603 95 ntBASIC5.13□□□□□ -1.59
LRCH3Q96II8 SNORA31.23-201ENST00000517219 133 ntBASIC5.13□□□□□ -1.59
LRCH3Q96II8 AC018630.3-201ENST00000542637 96 ntBASIC5.13□□□□□ -1.59
LRCH3Q96II8 AL022401.1-201ENST00000619498 108 ntBASIC5.13□□□□□ -1.59
LRCH3Q96II8 MIR6839-201ENST00000620425 113 ntBASIC5.13□□□□□ -1.59
LRCH3Q96II8 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC5.13□□□□□ -1.59
LRCH3Q96II8 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.13□□□□□ -1.59
LRCH3Q96II8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LRCH3Q96II8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.13□□□□□ -1.59
LRCH3Q96II8 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRCH3Q96II8 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.13□□□□□ -1.59
LRCH3Q96II8 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.13□□□□□ -1.59
LRCH3Q96II8 AC010266.2-201ENST00000564741 3255 ntBASIC5.13□□□□□ -1.59
LRCH3Q96II8 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.13□□□□□ -1.59
LRCH3Q96II8 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRCH3Q96II8 AC093591.2-201ENST00000565254 3843 ntBASIC5.13□□□□□ -1.59
LRCH3Q96II8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRCH3Q96II8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRCH3Q96II8 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.13□□□□□ -1.59
LRCH3Q96II8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRCH3Q96II8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRCH3Q96II8 MTND5P18-201ENST00000445624 1801 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 AL031595.2-201ENST00000624215 19071 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 RNU6-508P-201ENST00000363231 103 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 RNU6-978P-201ENST00000364371 103 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 SNORA51.10-201ENST00000384418 136 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 AL603914.1-201ENST00000401964 204 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 RN7SKP16-201ENST00000410180 299 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.12□□□□□ -1.59
LRCH3Q96II8 RPS4XP2-201ENST00000458402 793 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 RN7SL810P-201ENST00000493031 276 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.12□□□□□ -1.59
LRCH3Q96II8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.12□□□□□ -1.59
LRCH3Q96II8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.12□□□□□ -1.59
LRCH3Q96II8 AC011471.1-201ENST00000585766 187 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.12□□□□□ -1.59
LRCH3Q96II8 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 AC025521.1-201ENST00000621624 286 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 MIR3529-201ENST00000637713 78 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
LRCH3Q96II8 AC112198.2-201ENST00000426589 6996 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.12□□□□□ -1.59
LRCH3Q96II8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRCH3Q96II8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRCH3Q96II8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRCH3Q96II8 AC015813.6-201ENST00000624409 5808 ntBASIC5.12□□□□□ -1.59
LRCH3Q96II8 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
LRCH3Q96II8 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.11□□□□□ -1.59
LRCH3Q96II8 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRCH3Q96II8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LRCH3Q96II8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRCH3Q96II8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
LRCH3Q96II8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRCH3Q96II8 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.11□□□□□ -1.59
LRCH3Q96II8 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.11□□□□□ -1.59
LRCH3Q96II8 RNA5SP366-201ENST00000365454 123 ntBASIC5.11□□□□□ -1.59
LRCH3Q96II8 MIR320B2-201ENST00000408479 138 ntBASIC5.11□□□□□ -1.59
LRCH3Q96II8 MIR1290-201ENST00000408735 78 ntBASIC5.11□□□□□ -1.59
LRCH3Q96II8 RNU6ATAC-201ENST00000408749 126 ntBASIC5.11□□□□□ -1.59
LRCH3Q96II8 AC019205.3-201ENST00000424573 156 ntBASIC5.11□□□□□ -1.59
LRCH3Q96II8 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.11□□□□□ -1.59
LRCH3Q96II8 RPL26P9-201ENST00000457466 433 ntBASIC5.11□□□□□ -1.59
LRCH3Q96II8 AC006445.2-201ENST00000510061 472 ntBASIC5.11□□□□□ -1.59
LRCH3Q96II8 RNU1-103P-201ENST00000516502 125 ntBASIC5.11□□□□□ -1.59
LRCH3Q96II8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.11□□□□□ -1.59
LRCH3Q96II8 AC131055.1-201ENST00000584626 316 ntBASIC5.11□□□□□ -1.59
LRCH3Q96II8 CR392039.5-201ENST00000623201 510 ntBASIC5.11□□□□□ -1.59
LRCH3Q96II8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LRCH3Q96II8 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
LRCH3Q96II8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LRCH3Q96II8 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
LRCH3Q96II8 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRCH3Q96II8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LRCH3Q96II8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRCH3Q96II8 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LRCH3Q96II8 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
LRCH3Q96II8 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 543.6 ms