Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 RNU6-524P-201ENST00000384270 107 ntBASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 Y_RNA.609-201ENST00000410669 89 ntBASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 EIF5AP4-201ENST00000441206 465 ntBASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 AP001486.1-201ENST00000463339 476 ntBASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 RN7SKP288-201ENST00000516227 268 ntBASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 SCARNA18.1-201ENST00000516330 83 ntBASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 RNU1-30P-201ENST00000606575 163 ntBASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 MIR6793-201ENST00000612376 63 ntBASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 MIR1910-201ENST00000636955 80 ntBASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 AP001029.2-203ENST00000589795 4910 ntBASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
MS4A3Q96HJ5 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 Y_RNA.37-201ENST00000362606 108 ntBASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 Y_RNA.299-201ENST00000364973 94 ntBASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 RNU1-57P-201ENST00000384491 166 ntBASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 RNU6-1235P-201ENST00000384559 107 ntBASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 AC016909.1-201ENST00000415916 166 ntBASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 RNU6-498P-201ENST00000459468 107 ntBASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 AC093729.1-201ENST00000513074 128 ntBASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 SCGB1D5P-201ENST00000515134 247 ntBASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 HSPE1P5-201ENST00000561489 272 ntBASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 AC022655.2-201ENST00000577280 318 ntBASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 AC091932.4-201ENST00000623386 200 ntBASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 AC007656.2-201ENST00000624902 4547 ntBASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MS4A3Q96HJ5 AC025031.4-201ENST00000621248 3271 ntBASIC5.15□□□□□ -1.58
MS4A3Q96HJ5 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
MS4A3Q96HJ5 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
MS4A3Q96HJ5 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.15□□□□□ -1.58
MS4A3Q96HJ5 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
MS4A3Q96HJ5 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.15□□□□□ -1.58
MS4A3Q96HJ5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC5.15□□□□□ -1.58
MS4A3Q96HJ5 DNM1P47-203ENST00000571780 12667 ntBASIC5.15□□□□□ -1.58
MS4A3Q96HJ5 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
MS4A3Q96HJ5 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
MS4A3Q96HJ5 SNORD115-28-201ENST00000363931 81 ntBASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 RNU6-743P-201ENST00000364151 106 ntBASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 RNU4-16P-201ENST00000364737 141 ntBASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 RNA5SP211-201ENST00000365516 117 ntBASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 RAB6C-AS1-202ENST00000433431 123 ntBASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 RPS12P17-201ENST00000438591 377 ntBASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 AL663074.2-201ENST00000440621 479 ntBASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 ACA64.1-201ENST00000459171 127 ntBASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 AC098976.1-201ENST00000513014 541 ntBASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 Y_RNA.714-201ENST00000517065 90 ntBASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 AC004812.1-201ENST00000540773 146 ntBASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 AC126615.2-201ENST00000553003 515 ntBASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MS4A3Q96HJ5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MS4A3Q96HJ5 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
MS4A3Q96HJ5 FAM35DP-201ENST00000323387 2712 ntBASIC5.14□□□□□ -1.59
MS4A3Q96HJ5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
MS4A3Q96HJ5 RNU1-146P-201ENST00000364015 165 ntBASIC5.14□□□□□ -1.59
MS4A3Q96HJ5 Y_RNA.351-201ENST00000365436 96 ntBASIC5.14□□□□□ -1.59
MS4A3Q96HJ5 MIR1282-201ENST00000408865 101 ntBASIC5.14□□□□□ -1.59
MS4A3Q96HJ5 RNA5SP144-201ENST00000410846 116 ntBASIC5.14□□□□□ -1.59
MS4A3Q96HJ5 HSPE1P12-201ENST00000412576 301 ntBASIC5.14□□□□□ -1.59
MS4A3Q96HJ5 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.14□□□□□ -1.59
MS4A3Q96HJ5 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms