Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHFRQ96EP1 AL391987.6-201ENST00000305671 199 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 snoU2_19.2-201ENST00000363024 80 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 RNU6-740P-201ENST00000364734 105 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 RNU6-596P-201ENST00000365395 98 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 Y_RNA.352-201ENST00000365439 102 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 Y_RNA.526-201ENST00000384572 110 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 EI24P2-201ENST00000397776 1076 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 AL139039.1-201ENST00000401900 692 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 MIR1298-201ENST00000408783 112 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 Y_RNA.793-201ENST00000411222 111 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 UBE2V1P4-201ENST00000425374 344 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 RPEP5-201ENST00000441137 268 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 HMGB3P8-201ENST00000449709 577 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.63□□□□□ -1.83
CHFRQ96EP1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 RNU7-120P-201ENST00000459334 63 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.63□□□□□ -1.83
CHFRQ96EP1 RPS29P2-201ENST00000479278 136 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHFRQ96EP1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.63□□□□□ -1.83
CHFRQ96EP1 RNU6-711P-201ENST00000517255 106 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 AC034114.1-201ENST00000520293 285 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 AC004024.1-201ENST00000549244 247 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 MIR4643-201ENST00000577473 78 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.63□□□□□ -1.83
CHFRQ96EP1 AL390123.1-201ENST00000603216 237 ntBASIC3.63□□□□□ -1.83
CHFRQ96EP1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.63□□□□□ -1.83
CHFRQ96EP1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.63□□□□□ -1.83
CHFRQ96EP1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHFRQ96EP1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHFRQ96EP1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHFRQ96EP1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHFRQ96EP1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHFRQ96EP1 Y_RNA.54-201ENST00000362766 105 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 Y_RNA.81-201ENST00000362997 102 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 RNY1P16-201ENST00000363063 111 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 Y_RNA.170-201ENST00000363746 110 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 RNU6-682P-201ENST00000363843 106 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 RNU6-1078P-201ENST00000364522 103 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 RNU6-1303P-201ENST00000364841 107 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 RNU6-1329P-201ENST00000365664 107 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.62□□□□□ -1.83
CHFRQ96EP1 RNU6-708P-201ENST00000384217 107 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 MIR128-1-201ENST00000384921 82 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 RNU2-15P-201ENST00000410692 191 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 RN7SKP53-201ENST00000411337 315 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.62□□□□□ -1.83
CHFRQ96EP1 EIF4EP2-201ENST00000422816 654 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.62□□□□□ -1.83
CHFRQ96EP1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHFRQ96EP1 RN7SL807P-201ENST00000470923 297 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.62□□□□□ -1.83
CHFRQ96EP1 COX7A2P2-201ENST00000505291 250 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.62□□□□□ -1.83
CHFRQ96EP1 AC074198.2-201ENST00000508153 258 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 RNU7-4P-201ENST00000516961 62 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 IGKV2-26-201ENST00000518305 343 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 DEFB108E-201ENST00000524692 240 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.62□□□□□ -1.83
CHFRQ96EP1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.62□□□□□ -1.83
CHFRQ96EP1 AL355877.2-201ENST00000603670 358 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 AC002044.1-201ENST00000606707 158 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 MIR1244-1-201ENST00000612829 85 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 U7.8-201ENST00000619968 63 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 AL589994.2-201ENST00000621124 579 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 AC006111.3-201ENST00000622137 383 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 AC021753.1-201ENST00000635724 168 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 MIR1244-3-201ENST00000635744 85 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 MIR1244-2-201ENST00000636449 85 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 MIR1244-4-202ENST00000636813 85 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CHFRQ96EP1 AL356274.2-201ENST00000624379 3752 ntBASIC3.62□□□□□ -1.83
CHFRQ96EP1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHFRQ96EP1 AC110774.1-201ENST00000623567 2018 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHFRQ96EP1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHFRQ96EP1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.61□□□□□ -1.83
CHFRQ96EP1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHFRQ96EP1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.61□□□□□ -1.83
CHFRQ96EP1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CHFRQ96EP1 RNU6-1284P-201ENST00000363701 100 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 RNU6-1081P-201ENST00000384537 107 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 U3.42-201ENST00000408746 214 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.61□□□□□ -1.83
CHFRQ96EP1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.61□□□□□ -1.83
CHFRQ96EP1 AC127537.2-201ENST00000439258 465 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 RN7SL432P-201ENST00000484057 298 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 MLLT10P2-201ENST00000506434 249 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 RNU6-346P-201ENST00000516288 111 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 AC104576.1-201ENST00000524225 88 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 DEFB108D-201ENST00000527787 222 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 AC087441.2-201ENST00000529141 262 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.61□□□□□ -1.83
CHFRQ96EP1 AC012493.2-201ENST00000595083 291 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 AL158032.1-201ENST00000605401 106 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 BRDTP1-201ENST00000605735 677 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 AC004832.4-201ENST00000608952 331 ntBASIC3.61□□□□□ -1.83
CHFRQ96EP1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms