Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RBBP8P1-201ENST00000449447 1844 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 OR56A5-201ENST00000340110 738 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 RNA5SP387-201ENST00000364226 106 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 Y_RNA.333-201ENST00000365274 102 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 RNU6-259P-201ENST00000383999 107 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 MIR196B-201ENST00000384852 84 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 SNORA16.2-201ENST00000390991 127 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 SNORA46.1-201ENST00000391069 153 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 RNU6-1158P-201ENST00000391167 107 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AL445529.1-201ENST00000398713 389 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AL353193.1-201ENST00000421444 268 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 COTL1P1-201ENST00000422309 375 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 EIF4EP4-201ENST00000424916 578 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 TIMM9P3-201ENST00000428659 274 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AL365400.1-201ENST00000431854 640 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC073415.1-201ENST00000449240 153 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 PSPHP1-201ENST00000450062 261 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AL122001.1-201ENST00000457027 370 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 RNU7-63P-201ENST00000459054 62 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 RNU7-180P-201ENST00000459240 63 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC096576.1-201ENST00000489014 359 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 MTCO3P7-201ENST00000510008 774 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC008413.1-201ENST00000511864 177 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC114781.4-201ENST00000513707 639 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 RNU6-1178P-201ENST00000516674 107 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 COPS8P3-201ENST00000526024 482 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 CYCSP26-201ENST00000534107 320 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 BNIP3P6-201ENST00000549284 499 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 MTATP6P3-201ENST00000581686 676 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC090897.2-201ENST00000581715 130 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 MIR4424-201ENST00000585257 86 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 BNIP3P30-201ENST00000601184 574 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AL136363.2-201ENST00000604173 851 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC007684.1-201ENST00000609671 477 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 MIR7106-201ENST00000612419 65 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC009233.1-201ENST00000616477 371 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AC026585.1-201ENST00000619582 524 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 AL160394.1-201ENST00000624765 724 ntBASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.83□□□□□ -2.12
RPUSD4Q96CM3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC069528.2-201ENST00000624849 1991 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 RNU6-78P-201ENST00000362897 107 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 SNORD114-19-201ENST00000363072 75 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 RNU6-529P-201ENST00000363383 104 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 SNORA3A-201ENST00000364113 130 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 RNU6-996P-201ENST00000365438 107 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 Y_RNA.481-201ENST00000384373 102 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 MIR218-1-201ENST00000384999 110 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 RNU4-55P-201ENST00000410731 137 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 CYCSP48-201ENST00000417124 323 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC074117.2-201ENST00000417130 397 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 TOMM20P4-201ENST00000427861 435 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 USP9YP14-201ENST00000430663 563 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC236972.1-201ENST00000433225 199 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC016691.1-201ENST00000441321 413 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC025750.2-201ENST00000442609 450 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC013470.1-201ENST00000453438 462 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 SNRPFP3-201ENST00000457792 225 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 snoU109.2-201ENST00000459316 135 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC006512.1-201ENST00000468816 291 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC083798.1-201ENST00000472671 131 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AL163973.1-201ENST00000484753 577 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC097462.2-201ENST00000504623 481 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 RNA5SP320-201ENST00000516263 124 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 SNORA25.17-201ENST00000517184 124 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 HIF1AP1-201ENST00000553642 175 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AL133241.1-201ENST00000556832 487 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC008536.2-201ENST00000607284 349 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AL162373.1-201ENST00000620433 407 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC006386.2-201ENST00000624491 75 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC012005.1-201ENST00000624575 75 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 U4.7-201ENST00000638126 106 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 AC016717.2-201ENST00000609089 5141 ntBASIC1.82□□□□□ -2.12
RPUSD4Q96CM3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RPUSD4Q96CM3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms