Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MIR148B-201ENST00000362252 99 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 Y_RNA.482-201ENST00000384377 111 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 RNU6-19P-201ENST00000384718 107 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 RNU6-750P-201ENST00000390946 107 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 AL030996.1-201ENST00000411430 235 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 PTGES3P4-201ENST00000426243 356 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.46□□□□□ -1.86
HPS3Q969F9 RPS12P18-201ENST00000442381 270 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 U8.21-201ENST00000459536 136 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 MTND4P17-201ENST00000470444 350 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 AC018437.1-201ENST00000492214 406 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.46□□□□□ -1.86
HPS3Q969F9 ACA59.2-201ENST00000517061 156 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 IMMP1LP2-201ENST00000552954 492 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 AC009163.5-201ENST00000575421 637 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.46□□□□□ -1.86
HPS3Q969F9 MIR4795-201ENST00000584182 89 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 POLR3GP2-201ENST00000588366 668 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 AL133393.1-201ENST00000603277 287 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 AL355877.2-201ENST00000603670 358 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HPS3Q969F9 AC019193.3-201ENST00000609144 554 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 AC107294.3-201ENST00000609211 526 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 AL591516.1-201ENST00000611326 274 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 AC018692.3-201ENST00000623929 123 ntBASIC3.46□□□□□ -1.86
HPS3Q969F9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HPS3Q969F9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HPS3Q969F9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.45□□□□□ -1.86
HPS3Q969F9 Y_RNA.11-201ENST00000362375 109 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 U3.6-201ENST00000363622 211 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 SNORD116-20-201ENST00000384529 92 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 RNU6-1245P-201ENST00000411130 106 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS3Q969F9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS3Q969F9 AC236972.2-201ENST00000434979 310 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 PCMTD1P1-201ENST00000455560 355 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 AC107626.1-201ENST00000471084 183 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 AC114801.2-201ENST00000503825 781 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 MTCYBP40-201ENST00000509390 1135 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 AC116337.1-201ENST00000509680 687 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS3Q969F9 SMURF2P1-201ENST00000514992 481 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 RNU5F-8P-201ENST00000515941 111 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.45□□□□□ -1.86
HPS3Q969F9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS3Q969F9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.45□□□□□ -1.86
HPS3Q969F9 AC010653.1-201ENST00000571108 881 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.45□□□□□ -1.86
HPS3Q969F9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.45□□□□□ -1.86
HPS3Q969F9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS3Q969F9 AC009314.1-201ENST00000603871 304 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 AC016727.1-205ENST00000605437 569 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 MIR3529-201ENST00000637713 78 ntBASIC3.45□□□□□ -1.86
HPS3Q969F9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
HPS3Q969F9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
HPS3Q969F9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HPS3Q969F9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HPS3Q969F9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.44□□□□□ -1.86
HPS3Q969F9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HPS3Q969F9 RPL9P7-201ENST00000330965 580 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 RNU6-428P-201ENST00000362942 107 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 RNU6-790P-201ENST00000384479 105 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 RNU6-601P-201ENST00000384540 107 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.44□□□□□ -1.86
HPS3Q969F9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.44□□□□□ -1.86
HPS3Q969F9 AL513043.1-201ENST00000439124 535 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.44□□□□□ -1.86
HPS3Q969F9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.44□□□□□ -1.86
HPS3Q969F9 RNU7-187P-201ENST00000458985 68 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 RPL9P9-202ENST00000466501 579 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 MED28P2-201ENST00000475771 317 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 RN7SL20P-201ENST00000488827 297 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 AC110794.1-201ENST00000505816 425 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 RNU6-559P-201ENST00000516151 98 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.44□□□□□ -1.86
HPS3Q969F9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.44□□□□□ -1.86
HPS3Q969F9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.44□□□□□ -1.86
HPS3Q969F9 TRAV32-201ENST00000553993 340 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.44□□□□□ -1.86
HPS3Q969F9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.44□□□□□ -1.86
HPS3Q969F9 VN1R107P-201ENST00000601784 209 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 AC124303.1-201ENST00000605703 360 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 AC004832.5-201ENST00000608677 401 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 AL161423.1-201ENST00000613700 262 ntBASIC3.44□□□□□ -1.86
HPS3Q969F9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HPS3Q969F9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.44□□□□□ -1.86
HPS3Q969F9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HPS3Q969F9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HPS3Q969F9 AC073544.1-201ENST00000600110 1595 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HPS3Q969F9 MTND4P23-201ENST00000447723 1363 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HPS3Q969F9 RNU6-105P-201ENST00000363909 104 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 CD24P4-201ENST00000382840 243 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 SNORA7.4-201ENST00000384249 137 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 RNU6-1297P-201ENST00000384415 104 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 RNU6-325P-201ENST00000411132 105 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms