Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
BRF1Q92994 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.08□□□□□ -1.76
BRF1Q92994 MIR3690-201ENST00000580266 75 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 RMST_8.1-201ENST00000610287 165 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 U7.8-201ENST00000619968 63 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 AC090617.7-201ENST00000623952 126 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 AL034408.1-202ENST00000636088 415 ntBASIC4.08□□□□□ -1.76
BRF1Q92994 AC090740.1-201ENST00000623193 2262 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 AL513302.2-201ENST00000562313 1842 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BRF1Q92994 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.07□□□□□ -1.76
BRF1Q92994 RNU6-50P-201ENST00000362356 103 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 RNU6-78P-201ENST00000362897 107 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 AP002088.1-201ENST00000382740 395 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 RNU6-611P-201ENST00000384276 104 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 Y_RNA.518-201ENST00000384552 113 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 MIR628-201ENST00000385229 95 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 MT-TW-201ENST00000387382 68 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.07□□□□□ -1.76
BRF1Q92994 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.07□□□□□ -1.76
BRF1Q92994 MTATP6P7-201ENST00000453315 681 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 SNORD127-201ENST00000458892 86 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 RNU6-1132P-201ENST00000459214 107 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 SNORA70.19-201ENST00000516717 90 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 RNU6-897P-201ENST00000517135 105 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 TGIF1P1-201ENST00000558095 802 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 CYCSP39-201ENST00000565821 309 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 ZNF192P1-203ENST00000565888 810 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 AC104581.2-201ENST00000572227 430 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 AC078899.3-201ENST00000599065 212 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 AL020997.2-201ENST00000602607 184 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 FTX_3.1-201ENST00000610451 147 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 U2.21-201ENST00000637295 81 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 U6.104-201ENST00000637979 90 ntBASIC4.07□□□□□ -1.76
BRF1Q92994 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BRF1Q92994 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BRF1Q92994 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.07□□□□□ -1.76
BRF1Q92994 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.07□□□□□ -1.76
BRF1Q92994 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BRF1Q92994 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.06□□□□□ -1.76
BRF1Q92994 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.06□□□□□ -1.76
BRF1Q92994 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
BRF1Q92994 AP000560.1-201ENST00000624150 1937 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 Y_RNA.350-201ENST00000365409 98 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 RNU6-1026P-201ENST00000384465 108 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 MIR493-201ENST00000385254 89 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BRF1Q92994 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 U3.37-201ENST00000408528 213 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.06□□□□□ -1.76
BRF1Q92994 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.06□□□□□ -1.76
BRF1Q92994 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.06□□□□□ -1.76
BRF1Q92994 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.06□□□□□ -1.76
BRF1Q92994 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.06□□□□□ -1.76
BRF1Q92994 snoU109.2-201ENST00000459316 135 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 RPL21P104-201ENST00000464143 478 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.06□□□□□ -1.76
BRF1Q92994 AC025518.1-201ENST00000479856 347 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 SNORA40.15-201ENST00000516884 107 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 MIR2276-201ENST00000516886 89 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.06□□□□□ -1.76
BRF1Q92994 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 AC034105.4-201ENST00000568304 277 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 MIR4782-201ENST00000577987 79 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 MIR4644-201ENST00000579929 84 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 MIR3922-201ENST00000585192 84 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
BRF1Q92994 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.06□□□□□ -1.76
BRF1Q92994 U6.99-201ENST00000637524 83 ntBASIC4.06□□□□□ -1.76
BRF1Q92994 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BRF1Q92994 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BRF1Q92994 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
BRF1Q92994 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
BRF1Q92994 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
BRF1Q92994 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.05□□□□□ -1.76
BRF1Q92994 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.05□□□□□ -1.76
BRF1Q92994 MFSD8-233ENST00000641482 4860 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BRF1Q92994 Y_RNA.19-201ENST00000362462 99 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 Y_RNA.376-201ENST00000365638 108 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
BRF1Q92994 SNORA12.2-201ENST00000391040 156 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 RN7SKP177-201ENST00000410567 355 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 AP000275.1-201ENST00000411943 390 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.05□□□□□ -1.76
BRF1Q92994 AL512844.2-201ENST00000433990 593 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 GOT2P5-201ENST00000433995 546 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 RPS4XP2-201ENST00000458402 793 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.05□□□□□ -1.76
BRF1Q92994 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.05□□□□□ -1.76
BRF1Q92994 AC110768.1-201ENST00000509222 400 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 AC074250.1-201ENST00000511117 192 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.05□□□□□ -1.76
BRF1Q92994 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.05□□□□□ -1.76
BRF1Q92994 AC026403.1-201ENST00000518938 295 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 AC091144.1-201ENST00000519573 138 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 IGKV2D-19-201ENST00000523346 262 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 AC010186.2-204ENST00000537668 439 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.05□□□□□ -1.76
BRF1Q92994 AC011602.1-201ENST00000546484 331 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms