Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SNORD114-2-201ENST00000363953 78 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNU6-207P-201ENST00000384137 107 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC003071.1-201ENST00000451219 789 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC112492.4-201ENST00000456549 352 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC023538.1-201ENST00000534576 736 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC005832.3-201ENST00000537929 631 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RRN3P3-201ENST00000549207 578 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL021879.1-201ENST00000611756 288 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC009268.2-201ENST00000621925 457 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC079416.3-201ENST00000624479 549 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 UBE2V1P15-201ENST00000407776 448 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 MTND1P28-201ENST00000435623 950 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 SNORD97-201ENST00000459187 142 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNA5SP216-201ENST00000516111 123 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNU5B-3P-201ENST00000516601 115 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC087894.1-201ENST00000538359 518 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC004812.1-201ENST00000540773 146 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 FAM71BP1-201ENST00000604431 523 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL133445.2-201ENST00000611191 527 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 ZNF702P-202ENST00000434269 1966 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 Y_RNA.142-201ENST00000363491 102 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 MIR506-201ENST00000384998 124 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 DYNLT3P2-201ENST00000442517 295 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC027338.1-201ENST00000514840 825 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AF129408.1-201ENST00000608767 431 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL157770.1-201ENST00000623049 439 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNU1-58P-201ENST00000362413 163 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNU6-16P-201ENST00000384385 107 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 UBE2V1P4-201ENST00000425374 344 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 UBE2D3P3-201ENST00000426992 425 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 MTCYBP15-201ENST00000433123 1127 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 MTND2P4-201ENST00000445034 1004 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC011005.2-201ENST00000487324 359 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL163195.1-201ENST00000496941 348 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 SNORA31.3-201ENST00000516029 96 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNU6-751P-201ENST00000516382 101 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 U6.99-201ENST00000637524 83 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 ZNF680P1-201ENST00000436625 1469 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL589826.1-201ENST00000340697 249 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNU1-39P-201ENST00000383897 165 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNU11-3P-201ENST00000391111 133 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 DHFRP6-201ENST00000401776 268 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 FABP5P14-201ENST00000437273 393 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RPS27P1-201ENST00000450552 247 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 TRBVA-201ENST00000498804 316 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC113347.3-201ENST00000509113 148 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 MTCYBP43-201ENST00000513621 740 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL445435.1-201ENST00000604232 665 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 ELOCP5-201ENST00000604924 333 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC107952.2-201ENST00000606048 486 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC034229.4-201ENST00000607861 441 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC100821.1-201ENST00000523153 2479 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 MTND4P14-201ENST00000435799 1354 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNU6-48P-201ENST00000384161 107 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNU6-114P-201ENST00000384704 105 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 MIR518A2-201ENST00000384966 87 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL109755.1-201ENST00000401791 649 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 PTGES3P4-201ENST00000426243 356 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNU7-193P-201ENST00000516723 65 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 CYB5AP5-201ENST00000549779 389 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC233702.2-202ENST00000562547 291 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 BNIP3P16-201ENST00000589779 534 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 PART1_2.1-201ENST00000612397 250 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms