Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 MTND3P19-201ENST00000603825 345 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AL365204.3-201ENST00000612448 685 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AL132822.1-201ENST00000617063 513 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 RNU6-1010P-201ENST00000362757 107 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 SMIM11P1-201ENST00000369586 178 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 SNORA75B-201ENST00000384053 137 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 MIR186-201ENST00000384988 86 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 RNA5SP100-201ENST00000410903 110 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 RNA5SP59-201ENST00000410922 110 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AC016831.2-201ENST00000417179 352 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 RAC1P6-201ENST00000423911 575 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AL022400.1-201ENST00000423946 935 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AL354941.1-201ENST00000438600 464 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 RNU6-953P-201ENST00000459154 107 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AL121594.1-201ENST00000475906 575 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AC104982.1-201ENST00000478775 574 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AC099513.1-201ENST00000490423 301 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 RNU2-53P-201ENST00000516257 147 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 RNU6-914P-201ENST00000516749 109 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 RNU6-1315P-201ENST00000517187 99 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AC136618.2-201ENST00000575091 400 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AC112220.3-201ENST00000605502 502 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 RNU6-88P-201ENST00000606801 100 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AC106858.1-201ENST00000637497 429 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 RBBP8P1-201ENST00000449447 1844 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 AC027514.1-201ENST00000588561 1603 ntBASIC1.26□□□□□ -2.21
CCDC112Q8NEF3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 RNU6-433P-201ENST00000363216 104 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 SNORD14B-201ENST00000364533 90 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 Y_RNA.465-201ENST00000384293 102 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 RNU6-1025P-201ENST00000410629 104 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 PIGPP2-201ENST00000411569 458 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 AC092648.1-201ENST00000425870 423 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 AC244505.5-201ENST00000443639 207 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 AL358794.1-201ENST00000445689 381 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 MED28P2-201ENST00000475771 317 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 AC109927.2-201ENST00000506416 303 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 AC010587.2-201ENST00000511727 448 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 PTP4A1P4-201ENST00000512479 322 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 RNA5SP102-201ENST00000516865 106 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 MIR1273C-201ENST00000578669 77 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 VN1R82P-201ENST00000601481 356 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 AC073410.2-201ENST00000603240 332 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 AC073413.2-201ENST00000604332 360 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 AC022893.3-201ENST00000607665 437 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 AC093788.1-201ENST00000609356 927 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 AL359740.1-201ENST00000624340 592 ntBASIC1.25□□□□□ -2.21
CCDC112Q8NEF3 RNU1-58P-201ENST00000362413 163 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 RNU6-942P-201ENST00000363002 107 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 RNU6-723P-201ENST00000383973 107 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 RNU6-611P-201ENST00000384276 104 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 RNU6-843P-201ENST00000384454 104 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 RNU6-1274P-201ENST00000384557 107 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 MTATP6P20-201ENST00000414147 562 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 OR6C66P-201ENST00000414917 930 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 AC003071.1-201ENST00000451219 789 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 snoU13.18-201ENST00000459483 104 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 AP003392.2-201ENST00000527269 208 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 AL157871.3-201ENST00000557231 293 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 AC072039.2-201ENST00000608883 439 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 uc_338.15-201ENST00000615470 191 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 AC092656.1-203ENST00000624134 423 ntBASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.24□□□□□ -2.21
CCDC112Q8NEF3 MTND5P35-201ENST00000557537 1720 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 RNU6-529P-201ENST00000363383 104 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 SNORA62.1-201ENST00000364287 154 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 SNORA22-201ENST00000383907 134 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 SNORA22C-201ENST00000384614 134 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 MIR513A1-201ENST00000385138 129 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 RNU2-32P-201ENST00000411193 191 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 RPS3AP37-201ENST00000419176 745 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 TOMM22P2-201ENST00000430735 237 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 MTCO3P5-201ENST00000433620 714 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms