Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 AL162713.1-201ENST00000604480 262 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 AC100827.5-201ENST00000615883 426 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 MIR3914-2-201ENST00000637339 95 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 AC025031.4-201ENST00000621248 3271 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 RNU6-235P-201ENST00000362644 107 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 Y_RNA.229-201ENST00000364347 113 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 SNORA25.7-201ENST00000364375 127 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 RNU6-728P-201ENST00000365375 104 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 Y_RNA.368-201ENST00000365547 113 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 UBBP2-201ENST00000376781 231 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 MIR124-3-201ENST00000384866 87 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 RPL21P17-201ENST00000397467 475 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 RNA5SP390-201ENST00000410191 113 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 RNU6-855P-201ENST00000410395 104 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 EIF4HP2-201ENST00000424380 563 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 RPL30P5-201ENST00000494923 336 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 RN7SL558P-201ENST00000497468 299 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 RNU6-581P-201ENST00000516214 105 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 MIR5688-201ENST00000580619 83 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 AC011471.1-201ENST00000585766 187 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC116Q8IYX3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 AL136164.4-201ENST00000625013 2135 ntBASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 Y_RNA.294-201ENST00000364916 102 ntBASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 MIR493-201ENST00000385254 89 ntBASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 SNORA75.5-201ENST00000391291 81 ntBASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 RN7SKP177-201ENST00000410567 355 ntBASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 AL356535.1-201ENST00000440335 398 ntBASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 RNU7-141P-201ENST00000459304 62 ntBASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 RN7SL860P-201ENST00000473738 223 ntBASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 MTND6P33-201ENST00000571794 183 ntBASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 AL121932.1-201ENST00000605542 214 ntBASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 MIR6748-201ENST00000610433 71 ntBASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 SNORD98-201ENST00000636377 67 ntBASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC116Q8IYX3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 RNA5SP515-201ENST00000364570 118 ntBASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 Y_RNA.341-201ENST00000365341 102 ntBASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 RNU6-622P-201ENST00000384272 103 ntBASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 EI24P2-201ENST00000397776 1076 ntBASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 NDUFS5P4-201ENST00000412983 318 ntBASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 AC099548.1-201ENST00000421443 426 ntBASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 RNU6-772P-201ENST00000516042 105 ntBASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 RNU6-168P-201ENST00000516189 101 ntBASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 AC008033.2-201ENST00000542626 177 ntBASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 AC093249.4-201ENST00000564755 259 ntBASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 AC012640.5-201ENST00000623897 319 ntBASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 NOL8P1-201ENST00000508336 3529 ntBASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC116Q8IYX3 INTS6P1-201ENST00000504674 2530 ntBASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms