Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL590762.2-201ENST00000395798 571 ntBASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 AC146944.2-203ENST00000502493 354 ntBASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 AC139495.1-202ENST00000513164 354 ntBASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 SNORA31.8-201ENST00000516327 108 ntBASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 MIR3936-201ENST00000584304 110 ntBASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 FTX_3.1-201ENST00000610451 147 ntBASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 AL021997.2-201ENST00000615674 271 ntBASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCUBE3Q8IX30 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SCUBE3Q8IX30 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SCUBE3Q8IX30 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
SCUBE3Q8IX30 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SCUBE3Q8IX30 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SCUBE3Q8IX30 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
SCUBE3Q8IX30 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.96□□□□□ -1.61
SCUBE3Q8IX30 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 Y_RNA.35-201ENST00000362601 101 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 RNU6-597P-201ENST00000365620 102 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 RNU1-73P-201ENST00000383971 164 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 MIR548A3-201ENST00000385297 97 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 RNU6-855P-201ENST00000410395 104 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 snoU13.24-201ENST00000458998 104 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 SNORA31.16-201ENST00000516773 139 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 CYP4A27P-201ENST00000567218 190 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 RNA5SP108-201ENST00000605921 117 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 ADAM3A-203ENST00000461344 2157 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 AC000123.3-201ENST00000624029 4975 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 SALL4P2-201ENST00000423288 2910 ntBASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.96□□□□□ -1.62
SCUBE3Q8IX30 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 AL590240.1-201ENST00000334118 313 ntBASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 Y_RNA.116-201ENST00000363292 103 ntBASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 Y_RNA.243-201ENST00000364481 109 ntBASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 Y_RNA.310-201ENST00000365063 113 ntBASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 Y_RNA.630-201ENST00000411370 108 ntBASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 BX510359.2-201ENST00000417920 305 ntBASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 CYCSP49-201ENST00000420810 319 ntBASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 AC016831.4-201ENST00000438302 307 ntBASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 RPL37P4-201ENST00000448908 268 ntBASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 RPL31P41-201ENST00000477967 372 ntBASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 RNU6-1061P-201ENST00000516530 99 ntBASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 MIR3529-201ENST00000637713 78 ntBASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 AL136164.3-201ENST00000624429 3978 ntBASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCUBE3Q8IX30 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 MIR367-201ENST00000362299 68 ntBASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 RNY3P5-201ENST00000384127 102 ntBASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 MIR325-201ENST00000385260 98 ntBASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 U3.26-201ENST00000391236 204 ntBASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 RNA5SP390-201ENST00000410191 113 ntBASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 HMGN2P30-201ENST00000423237 256 ntBASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 AL031737.1-201ENST00000450125 223 ntBASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 AC012308.1-201ENST00000451232 178 ntBASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 AC090525.1-201ENST00000479116 478 ntBASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 HMGB1P22-201ENST00000505315 124 ntBASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 Y_RNA.677-201ENST00000516401 85 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms