Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 RPS15AP10-201ENST00000432472 382 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 AL160004.2-201ENST00000432935 350 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 AL035666.1-201ENST00000446195 348 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 RPL37P4-201ENST00000448908 268 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 HMGB3P8-201ENST00000449709 577 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 HMGN2P13-201ENST00000476476 274 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 AC021205.2-201ENST00000480069 347 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 FO393415.2-201ENST00000480085 343 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-988P-201ENST00000519081 107 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 AL355598.1-201ENST00000604169 202 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 AP000787.2-201ENST00000604432 568 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 MIR7106-201ENST00000612419 65 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 CUL1P1-201ENST00000509510 2425 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SFTPA1Q8IWL2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
SFTPA1Q8IWL2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.15□□□□□ -1.9
SFTPA1Q8IWL2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 MIR423-201ENST00000362201 94 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 SNORA5B-201ENST00000363786 132 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 Y_RNA.422-201ENST00000384054 114 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 RNU6-1035P-201ENST00000384477 107 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 RNU6-1160P-201ENST00000384546 104 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 RPS4XP3-201ENST00000398541 413 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 RNA5SP31-201ENST00000411144 127 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 RHEBP3-201ENST00000411920 351 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 AC243428.1-201ENST00000421099 264 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 AC099548.1-201ENST00000421443 426 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 DAP3P1-201ENST00000441522 278 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 RNU6-377P-201ENST00000515965 102 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 ACA59.1-201ENST00000515966 143 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 LINC00933-203ENST00000559812 219 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 MIR4273-201ENST00000582824 84 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 AC020895.1-201ENST00000595362 272 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 AL355802.3-201ENST00000607571 545 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 AC007485.1-201ENST00000616755 206 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 AC090617.7-201ENST00000623952 126 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 AC008725.1-201ENST00000605123 2263 ntBASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SFTPA1Q8IWL2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 Y_RNA.148-201ENST00000363557 117 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 RNU6-639P-201ENST00000384074 107 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 RNU6-55P-201ENST00000411092 107 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 RPL26P27-201ENST00000414397 437 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AL139132.1-201ENST00000431587 344 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AL353997.1-201ENST00000432936 108 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 MTATP6P7-201ENST00000453315 681 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 BTF3P15-201ENST00000455606 336 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 RNU6-307P-201ENST00000516743 106 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 RNU6-264P-201ENST00000517134 104 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AC109479.2-201ENST00000517842 174 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 CPDP1-201ENST00000579660 283 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 MIR4672-201ENST00000583126 81 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AC005899.2-201ENST00000584353 90 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 HSPE1P7-201ENST00000604681 321 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AL162730.1-201ENST00000605734 292 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AC006157.1-201ENST00000611750 366 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AC083806.3-201ENST00000614016 455 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AC004852.3-201ENST00000614131 326 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AC073308.1-201ENST00000623696 305 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 AC091903.1-201ENST00000624322 454 ntBASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SFTPA1Q8IWL2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SFTPA1Q8IWL2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SFTPA1Q8IWL2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms