Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC122133.1-201ENST00000613964 233 ntBASIC1.71□□□□□ -2.14
CDKL3Q8IVW4 AC008121.3-201ENST00000618726 433 ntBASIC1.71□□□□□ -2.14
CDKL3Q8IVW4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.71□□□□□ -2.14
CDKL3Q8IVW4 AC138393.1-203ENST00000327086 343 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 RNA5SP99-201ENST00000364020 114 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 SNORA26.9-201ENST00000391322 122 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 RPL23AP32-201ENST00000395315 459 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AL031577.2-201ENST00000404133 280 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 Y_RNA.598-201ENST00000410480 95 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 VN1R36P-201ENST00000414936 291 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AL031779.1-201ENST00000415663 330 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AC016831.2-201ENST00000417179 352 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AC009518.2-201ENST00000418056 731 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AC007677.1-201ENST00000445757 515 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 HMGB1P35-201ENST00000503360 598 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 RNU6-123P-201ENST00000516163 102 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 RNU6-250P-201ENST00000516958 103 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 ADI1P3-201ENST00000549509 470 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 PSMA3P-201ENST00000555485 635 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AL078605.1-201ENST00000603529 500 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AL670379.10-201ENST00000604330 253 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AL022154.1-201ENST00000604698 785 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AL670379.9-201ENST00000605428 253 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AL451064.1-201ENST00000607718 471 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AC012409.4-201ENST00000612923 249 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 MIR6845-201ENST00000613182 61 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AC022202.1-201ENST00000613515 211 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AL353997.5-201ENST00000618886 171 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 MTND4P4-201ENST00000439033 1366 ntBASIC1.7□□□□□ -2.14
CDKL3Q8IVW4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 RNU6-641P-201ENST00000384006 107 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 MIR558-201ENST00000384920 94 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 SNORA40.19-201ENST00000390846 128 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 CISD1P1-201ENST00000393907 327 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 RPS3AP36-201ENST00000398190 775 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 FTH1P15-201ENST00000406984 280 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 RNU2-39P-201ENST00000410604 198 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 MED13P1-201ENST00000428342 171 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AL603825.1-201ENST00000438481 80 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AC140059.1-201ENST00000489238 361 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AC022616.3-201ENST00000523940 148 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AC135279.1-201ENST00000543493 504 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AC092325.1-201ENST00000566449 554 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 DEFB131E-202ENST00000602581 683 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AL713866.2-201ENST00000603579 219 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 SEPT7P9-203ENST00000604116 343 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 MIR502-201ENST00000606349 86 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AC012360.2-201ENST00000609349 391 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 AC091304.9-201ENST00000612091 226 ntBASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CDKL3Q8IVW4 RNU6-858P-201ENST00000362436 107 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 SNORD3E-201ENST00000362899 217 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 RNA5SP363-201ENST00000365072 115 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 SNORA24.1-201ENST00000384401 135 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 MIR561-201ENST00000385216 97 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 RNU2-8P-201ENST00000410727 190 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 Y_RNA.623-201ENST00000411128 95 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 RN7SKP101-201ENST00000411376 320 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 RPS20P15-201ENST00000412792 311 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 AL365338.1-201ENST00000422282 858 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 AL133217.1-201ENST00000450980 425 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 ART2BP-201ENST00000453501 499 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 RAP1BP2-201ENST00000478270 544 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 AC117522.1-201ENST00000509821 380 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 AC112206.3-201ENST00000514578 389 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 SNORA4.4-201ENST00000515921 135 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 RNU5B-3P-201ENST00000516601 115 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 RNU2-46P-201ENST00000517038 113 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 RNU6-1220P-201ENST00000517126 108 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 AC233702.2-202ENST00000562547 291 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 MIR4285-201ENST00000581001 85 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 AC005771.1-201ENST00000585581 349 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 AL139286.2-201ENST00000606838 396 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 MIR8081-201ENST00000611533 95 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms