Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RFX6Q8HWS3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RFX6Q8HWS3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RFX6Q8HWS3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 Y_RNA.197-201ENST00000364004 102 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 RNA5SP72-201ENST00000364442 117 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 RNU6-1329P-201ENST00000365664 107 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 Y_RNA.445-201ENST00000384168 102 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 RNU6-166P-201ENST00000384371 107 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 ATG3P1-201ENST00000419507 911 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AL645568.3-201ENST00000433683 316 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AC074250.1-201ENST00000511117 192 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 RN7SKP43-201ENST00000516173 320 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 RNU6-1016P-201ENST00000516689 94 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 APOOP3-201ENST00000536787 586 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 HMGB1P14-201ENST00000557424 591 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 MIR5690-201ENST00000583739 73 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 ELOCP5-201ENST00000604924 333 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AC084757.4-201ENST00000616350 526 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 AC007318.2-201ENST00000620999 243 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 7SK.10-201ENST00000621414 298 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 MIR622-201ENST00000638396 96 ntBASIC3.14□□□□□ -1.91
RFX6Q8HWS3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RFX6Q8HWS3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC073325.2-201ENST00000339545 159 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 MIR22-201ENST00000362190 85 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 SNORD62.1-201ENST00000362541 86 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 Y_RNA.459-201ENST00000384251 102 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 RNU6-574P-201ENST00000384265 107 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC113618.1-201ENST00000416747 285 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AL096701.2-201ENST00000416920 238 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 PGBD4P6-201ENST00000421501 610 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 HMGN2P30-201ENST00000423237 256 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 RPL23AP58-201ENST00000440453 469 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC034236.1-201ENST00000469891 373 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC116337.1-201ENST00000509680 687 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 RN7SKP272-201ENST00000516988 232 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 RNU6-1137P-201ENST00000517073 99 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC022634.1-201ENST00000520765 532 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC104576.1-201ENST00000524225 88 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 MIR4782-201ENST00000577987 79 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AP000787.2-201ENST00000604432 568 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC123912.5-201ENST00000605470 343 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 MIR92B-201ENST00000607575 96 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC019193.3-201ENST00000609144 554 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AL138880.2-201ENST00000616214 239 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AL132822.1-201ENST00000617063 513 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC090617.7-201ENST00000623952 126 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 MTND5P27-201ENST00000428871 1720 ntBASIC3.13□□□□□ -1.91
RFX6Q8HWS3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.13□□□□□ -1.91
RFX6Q8HWS3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RFX6Q8HWS3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.12□□□□□ -1.91
RFX6Q8HWS3 Y_RNA.187-201ENST00000363918 113 ntBASIC3.12□□□□□ -1.91
RFX6Q8HWS3 MIR568-201ENST00000385036 95 ntBASIC3.12□□□□□ -1.91
RFX6Q8HWS3 SNORD73A-201ENST00000386062 65 ntBASIC3.12□□□□□ -1.91
RFX6Q8HWS3 AL445529.1-201ENST00000398713 389 ntBASIC3.12□□□□□ -1.91
RFX6Q8HWS3 MIR888-201ENST00000401186 77 ntBASIC3.12□□□□□ -1.91
RFX6Q8HWS3 RPL26P27-201ENST00000414397 437 ntBASIC3.12□□□□□ -1.91
RFX6Q8HWS3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX6Q8HWS3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.12□□□□□ -1.91
RFX6Q8HWS3 AL137792.2-201ENST00000443484 235 ntBASIC3.12□□□□□ -1.91
RFX6Q8HWS3 RPL37P4-201ENST00000448908 268 ntBASIC3.12□□□□□ -1.91
RFX6Q8HWS3 MTATP6P7-201ENST00000453315 681 ntBASIC3.12□□□□□ -1.91
RFX6Q8HWS3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms