Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC009127.3-201ENST00000570531 403 ntBASIC2.54□□□□□ -2
NUP54Q7Z3B4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.54□□□□□ -2
NUP54Q7Z3B4 RPS15AP11-201ENST00000594193 385 ntBASIC2.54□□□□□ -2
NUP54Q7Z3B4 AL670379.10-201ENST00000604330 253 ntBASIC2.54□□□□□ -2
NUP54Q7Z3B4 AL670379.9-201ENST00000605428 253 ntBASIC2.54□□□□□ -2
NUP54Q7Z3B4 AC004492.1-201ENST00000607036 742 ntBASIC2.54□□□□□ -2
NUP54Q7Z3B4 RNU6-91P-201ENST00000607774 107 ntBASIC2.54□□□□□ -2
NUP54Q7Z3B4 AC138627.2-201ENST00000624202 601 ntBASIC2.54□□□□□ -2
NUP54Q7Z3B4 Z69720.2-201ENST00000624755 279 ntBASIC2.54□□□□□ -2
NUP54Q7Z3B4 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.54□□□□□ -2
NUP54Q7Z3B4 AC073869.6-201ENST00000640656 341 ntBASIC2.54□□□□□ -2
NUP54Q7Z3B4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
NUP54Q7Z3B4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.54□□□□□ -2
NUP54Q7Z3B4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.53□□□□□ -2
NUP54Q7Z3B4 AC138393.1-203ENST00000327086 343 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 RNA5SP125-201ENST00000364843 120 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 RNU4-66P-201ENST00000365199 138 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 RNA5SP240-201ENST00000365355 128 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 Y_RNA.450-201ENST00000384198 113 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 MIR9-1-201ENST00000385198 89 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 RNA5SP21-201ENST00000410917 96 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.53□□□□□ -2
NUP54Q7Z3B4 MTCO1P20-201ENST00000425366 358 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.53□□□□□ -2
NUP54Q7Z3B4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.53□□□□□ -2
NUP54Q7Z3B4 DYNLL1P5-201ENST00000467158 270 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 MTCO3P38-201ENST00000468910 766 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 AC003982.1-202ENST00000469928 248 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 AC117503.1-201ENST00000472241 394 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 MED28P2-201ENST00000475771 317 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 RPL36AP48-201ENST00000485521 314 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 RNU5B-3P-201ENST00000516601 115 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 SNORA25.17-201ENST00000517184 124 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 MTND1P5-201ENST00000517906 940 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.53□□□□□ -2
NUP54Q7Z3B4 CR383656.8-201ENST00000549046 145 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 AC090115.3-201ENST00000553218 849 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 OR11H5P-201ENST00000554039 926 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.53□□□□□ -2
NUP54Q7Z3B4 AC136619.2-201ENST00000563361 631 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 MTCO3P13-201ENST00000577757 781 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.53□□□□□ -2
NUP54Q7Z3B4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
NUP54Q7Z3B4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.53□□□□□ -2
NUP54Q7Z3B4 DISC2.1-201ENST00000612827 205 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 RMST_7.1-201ENST00000621935 268 ntBASIC2.53□□□□□ -2
NUP54Q7Z3B4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 RNY3P3-201ENST00000363816 102 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 RNU4-12P-201ENST00000365233 139 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 RNU4-20P-201ENST00000365601 151 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 RN7SKP158-201ENST00000410453 326 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 RNU6-1068P-201ENST00000410958 103 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 ARL5AP1-201ENST00000418991 388 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 AC097463.2-201ENST00000421074 142 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 C8orf59P1-201ENST00000429930 303 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 AL121601.2-201ENST00000438019 707 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 AC025750.2-201ENST00000442609 450 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 AC124916.1-201ENST00000444020 547 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 MTND3P16-201ENST00000452205 344 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 RN7SL297P-201ENST00000483161 293 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 AC096576.1-201ENST00000489014 359 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 SNORA43.2-201ENST00000516652 128 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 CENPUP1-201ENST00000526649 1202 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 GTF3AP2-201ENST00000557014 266 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 AL033523.1-201ENST00000605153 153 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 MIR3529-201ENST00000637713 78 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 Z75746.1-201ENST00000440243 2080 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 HAUS6P2-201ENST00000433254 2404 ntBASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NUP54Q7Z3B4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 RNU6-858P-201ENST00000362436 107 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 RNU6-1090P-201ENST00000364065 94 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 RNU6-266P-201ENST00000364225 107 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 MIR592-201ENST00000384959 97 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 MIR514A2-201ENST00000385131 88 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 MIR514A3-201ENST00000385132 88 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 FCF1P9-201ENST00000412546 282 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 AL365400.1-201ENST00000431854 640 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 RPL7P12-201ENST00000446719 750 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 CYP2C59P-201ENST00000457790 269 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 CKS1BP2-201ENST00000497342 240 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 HMGB3P3-201ENST00000510526 400 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 RNA5SP76-201ENST00000516277 87 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 AC069113.1-201ENST00000517763 267 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 RPL7P20-201ENST00000520308 745 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 CYCSP27-201ENST00000527643 293 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms