Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 Z82210.1-201ENST00000440037 231 ntBASIC4.95□□□□□ -1.62
RNF20Q5VTR2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF20Q5VTR2 UQCRBP2-201ENST00000447827 297 ntBASIC4.95□□□□□ -1.62
RNF20Q5VTR2 AC007395.1-201ENST00000451333 677 ntBASIC4.95□□□□□ -1.62
RNF20Q5VTR2 SNORD2.1-201ENST00000458762 69 ntBASIC4.95□□□□□ -1.62
RNF20Q5VTR2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF20Q5VTR2 AC008745.1-201ENST00000604064 271 ntBASIC4.95□□□□□ -1.62
RNF20Q5VTR2 AC114781.5-201ENST00000615297 108 ntBASIC4.95□□□□□ -1.62
RNF20Q5VTR2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF20Q5VTR2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF20Q5VTR2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 RNU6-942P-201ENST00000363002 107 ntBASIC4.94□□□□□ -1.62
RNF20Q5VTR2 RNU5B-2P-201ENST00000363036 113 ntBASIC4.94□□□□□ -1.62
RNF20Q5VTR2 RNU6-142P-201ENST00000384019 107 ntBASIC4.94□□□□□ -1.62
RNF20Q5VTR2 RNU6-1145P-201ENST00000384246 107 ntBASIC4.94□□□□□ -1.62
RNF20Q5VTR2 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 Y_RNA.597-201ENST00000410463 100 ntBASIC4.94□□□□□ -1.62
RNF20Q5VTR2 RPL23AP26-201ENST00000412728 464 ntBASIC4.94□□□□□ -1.62
RNF20Q5VTR2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 AC025554.1-201ENST00000505641 188 ntBASIC4.94□□□□□ -1.62
RNF20Q5VTR2 SNORA40.9-201ENST00000515895 93 ntBASIC4.94□□□□□ -1.62
RNF20Q5VTR2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 IPO5P1-202ENST00000600039 287 ntBASIC4.94□□□□□ -1.62
RNF20Q5VTR2 AC024581.2-201ENST00000619986 252 ntBASIC4.94□□□□□ -1.62
RNF20Q5VTR2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 AC011944.2-201ENST00000624440 683 ntBASIC4.94□□□□□ -1.62
RNF20Q5VTR2 MIR3653-201ENST00000625572 110 ntBASIC4.94□□□□□ -1.62
RNF20Q5VTR2 SNORA43.4-201ENST00000629559 138 ntBASIC4.94□□□□□ -1.62
RNF20Q5VTR2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF20Q5VTR2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 MIR383-201ENST00000362257 73 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 RNA5SP502-201ENST00000362694 119 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 SNORD56.1-201ENST00000362913 68 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 Y_RNA.136-201ENST00000363444 102 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 SNORD32A-201ENST00000364805 84 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 SNORD116-20-201ENST00000384529 92 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 RNU6-159P-201ENST00000391080 106 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 UQCRHP4-201ENST00000471686 272 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 AC091167.1-201ENST00000492017 396 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 RPL29P14-201ENST00000495837 428 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 RNU1-103P-201ENST00000516502 125 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 RNU6-703P-201ENST00000516946 107 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 RNU6-58P-201ENST00000517143 103 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 MIR4284-201ENST00000578924 81 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 AC005176.2-201ENST00000596933 147 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 AC008568.2-201ENST00000623862 2313 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 AC016588.2-201ENST00000632484 3021 ntBASIC4.93□□□□□ -1.62
RNF20Q5VTR2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF20Q5VTR2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF20Q5VTR2 RNU1-32P-201ENST00000363937 159 ntBASIC4.92□□□□□ -1.62
RNF20Q5VTR2 Y_RNA.230-201ENST00000364348 109 ntBASIC4.92□□□□□ -1.62
RNF20Q5VTR2 RNU6-1130P-201ENST00000365434 107 ntBASIC4.92□□□□□ -1.62
RNF20Q5VTR2 SNORD116-18-201ENST00000383961 92 ntBASIC4.92□□□□□ -1.62
RNF20Q5VTR2 SNORA37-201ENST00000384504 129 ntBASIC4.92□□□□□ -1.62
RNF20Q5VTR2 MIR518D-201ENST00000385014 87 ntBASIC4.92□□□□□ -1.62
RNF20Q5VTR2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RNF20Q5VTR2 MTHFD2P2-201ENST00000407725 247 ntBASIC4.92□□□□□ -1.62
RNF20Q5VTR2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF20Q5VTR2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF20Q5VTR2 RPL23AP14-201ENST00000468281 468 ntBASIC4.92□□□□□ -1.62
RNF20Q5VTR2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF20Q5VTR2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.92□□□□□ -1.62
RNF20Q5VTR2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF20Q5VTR2 ZNF192P1-203ENST00000565888 810 ntBASIC4.92□□□□□ -1.62
RNF20Q5VTR2 AC108706.1-201ENST00000611053 297 ntBASIC4.92□□□□□ -1.62
RNF20Q5VTR2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.92□□□□□ -1.62
RNF20Q5VTR2 MIR7641-1-201ENST00000627518 61 ntBASIC4.92□□□□□ -1.62
RNF20Q5VTR2 AC018555.1-201ENST00000567548 1980 ntBASIC4.92□□□□□ -1.62
RNF20Q5VTR2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RNF20Q5VTR2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF20Q5VTR2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF20Q5VTR2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF20Q5VTR2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms