Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 RPL23AP78-201ENST00000599928 470 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 AC133104.2-201ENST00000615272 193 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 RBBP8P1-201ENST00000449447 1844 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 AC073544.1-201ENST00000600110 1595 ntBASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 RNU6-306P-201ENST00000384617 107 ntBASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 RNU6-1050P-201ENST00000410388 107 ntBASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 AP000275.1-201ENST00000411943 390 ntBASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 AL133396.1-201ENST00000432048 687 ntBASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 AC007969.2-201ENST00000441891 191 ntBASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 AC021205.2-201ENST00000480069 347 ntBASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 MTND4LP22-201ENST00000508209 276 ntBASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 AC105137.2-201ENST00000569073 466 ntBASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 AP001836.1-201ENST00000604675 523 ntBASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 AL359314.1-201ENST00000616913 261 ntBASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 AC098657.3-201ENST00000620434 263 ntBASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 AC007792.1-201ENST00000623023 402 ntBASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC144BQ3MJ40 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 RNU6-622P-201ENST00000384272 103 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 MIR521-1-201ENST00000384902 87 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 U3.39-201ENST00000408569 239 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 RPS20P15-201ENST00000412792 311 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 AC243964.1-201ENST00000441814 261 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 AC006539.3-201ENST00000454258 129 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 SEM1P1-201ENST00000506694 209 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 AC026782.1-201ENST00000512952 449 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 RNU6-307P-201ENST00000516743 106 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 RNU6-579P-201ENST00000516879 102 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 HPRT1P3-201ENST00000539521 576 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 AC090897.2-201ENST00000581715 130 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 AC078795.3-201ENST00000602913 472 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 AL133393.1-201ENST00000603277 287 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 AC126177.8-201ENST00000618339 1015 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 AC097372.5-201ENST00000623665 376 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 AC241585.2-209ENST00000638217 143 ntBASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC144BQ3MJ40 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 Y_RNA.259-201ENST00000364619 101 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 U8.8-201ENST00000365399 135 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 RNU6-1083P-201ENST00000384022 107 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 Y_RNA.460-201ENST00000384255 102 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 Y_RNA.535-201ENST00000384612 99 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 AL512633.1-201ENST00000399931 655 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 RNU4-14P-201ENST00000410858 122 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 SAR1AP4-201ENST00000429225 591 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 AC004383.1-201ENST00000438135 289 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 SNORD19B-201ENST00000459623 84 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 RPL31P41-201ENST00000477967 372 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 AP001025.1-201ENST00000486139 332 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 RPL22P13-201ENST00000493291 347 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 PTP4A1P4-201ENST00000512479 322 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 AC069234.5-201ENST00000611056 416 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 AL359757.2-201ENST00000624309 274 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 SNORA50A-202ENST00000629536 136 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 AC002543.1-201ENST00000299783 1954 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 MTND5P30-201ENST00000452896 1731 ntBASIC3.92□□□□□ -1.78
CCDC144BQ3MJ40 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 RNU1-75P-201ENST00000347264 129 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 SNORD114-19-201ENST00000363072 75 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 Y_RNA.315-201ENST00000365117 102 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 RNU6-1222P-201ENST00000384615 107 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 SNORA48.5-201ENST00000391143 135 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 U3.26-201ENST00000391236 204 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 USP9YP30-201ENST00000430729 455 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms