Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 LINC01355-201ENST00000566551 5444 ntBASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 RNU1-94P-201ENST00000362627 173 ntBASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 SNORA36C-201ENST00000384289 132 ntBASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 AL513331.1-201ENST00000411908 397 ntBASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 AC007560.1-201ENST00000426912 237 ntBASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 AP003730.1-201ENST00000524605 285 ntBASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 MIR4444-1-201ENST00000581696 74 ntBASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 MIR4444-2-201ENST00000584390 74 ntBASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 AL138963.2-201ENST00000605137 226 ntBASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 U3.53-201ENST00000628922 216 ntBASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 MIR492-201ENST00000638676 116 ntBASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 CENPCP1-201ENST00000533085 2578 ntBASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 AC099654.7-201ENST00000635788 2127 ntBASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CTC1Q2NKJ3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 RNU6-527P-201ENST00000363425 104 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 Y_RNA.287-201ENST00000364853 94 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 SNORA71.2-201ENST00000364941 134 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 RNU6-728P-201ENST00000365375 104 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 MIR488-201ENST00000365739 83 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 RNU1-13P-201ENST00000384499 162 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 SNORD96B-201ENST00000386148 79 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 U3.19-201ENST00000390893 196 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 RNA5SP317-201ENST00000410176 116 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 RNA5SP311-201ENST00000411290 116 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 MLLT10P1-201ENST00000418346 262 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 PHBP16-201ENST00000446318 950 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 AC146507.2-201ENST00000460608 476 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 RNA5SP315-201ENST00000516340 116 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 RNU6-781P-201ENST00000516377 101 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 SNORA67.7-201ENST00000516664 135 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 RNA5SP312-201ENST00000517068 116 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 AC136628.3-201ENST00000521868 290 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 AC091979.2-201ENST00000607514 214 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 BMS1P21-201ENST00000634565 365 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 AL672167.1-203ENST00000641299 2975 ntBASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CTC1Q2NKJ3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 AC021146.4-201ENST00000309229 279 ntBASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 RNU6-766P-201ENST00000362478 107 ntBASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 RNU6-137P-201ENST00000363680 108 ntBASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 RNU6-756P-201ENST00000383997 107 ntBASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 ELOCP21-201ENST00000412558 336 ntBASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 HSPE1P6-201ENST00000479457 291 ntBASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 AC105137.1-201ENST00000484355 562 ntBASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 SNORA31.19-201ENST00000517079 126 ntBASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 AL031274.2-201ENST00000599419 203 ntBASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 AC007390.2-201ENST00000606229 3803 ntBASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 AC138915.1-201ENST00000565427 1685 ntBASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CTC1Q2NKJ3 RNU1-83P-201ENST00000363426 164 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 Y_RNA.229-201ENST00000364347 113 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 RNA5SP366-201ENST00000365454 123 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 SNORA20B-201ENST00000384220 132 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 RNU6-166P-201ENST00000384371 107 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 MIR659-201ENST00000384963 97 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 RNA5SP225-201ENST00000410874 135 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 UQCRHP4-201ENST00000471686 272 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 RNU6-436P-201ENST00000516171 114 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 RNU6-709P-201ENST00000517257 104 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 AC093249.4-201ENST00000564755 259 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 IPO5P1-202ENST00000600039 287 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 AC120024.3-201ENST00000603167 156 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 AC005086.4-201ENST00000623065 213 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 MIR3653-201ENST00000625572 110 ntBASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 AL592182.3-201ENST00000642132 3304 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms