Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 AC068700.1-201ENST00000565862 3754 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RSPO4Q2I0M5 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RSPO4Q2I0M5 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 RNU6-640P-201ENST00000363693 105 ntBASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 RNU6-1164P-201ENST00000364428 107 ntBASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 RNU6-1131P-201ENST00000364955 107 ntBASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 Y_RNA.572-201ENST00000384757 98 ntBASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 MIR616-201ENST00000385293 97 ntBASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 OR2AH1P-201ENST00000425717 928 ntBASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 AC010095.1-201ENST00000443543 144 ntBASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 RNA5SP249-201ENST00000516127 99 ntBASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 RNU6-58P-201ENST00000517143 103 ntBASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 ZNF192P1-203ENST00000565888 810 ntBASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 AC013791.1-201ENST00000616619 62 ntBASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.21□□□□□ -1.74
RSPO4Q2I0M5 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 RNU1-14P-201ENST00000362759 152 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 Y_RNA.280-201ENST00000364765 112 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 Y_RNA.393-201ENST00000383936 102 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 Y_RNA.521-201ENST00000384560 114 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 MIR15B-201ENST00000385045 98 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 MIR34A-201ENST00000385130 110 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 SNORA75.5-201ENST00000391291 81 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 MIR888-201ENST00000401186 77 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 RNU6-603P-201ENST00000411403 107 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 HMGN2P31-201ENST00000432430 273 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 RPS27P1-201ENST00000450552 247 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 RNU6-625P-201ENST00000459412 107 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 AC062037.1-201ENST00000605302 128 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 AC007390.2-201ENST00000606229 3803 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 AC004832.5-201ENST00000608677 401 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 FAM27D1-201ENST00000612308 341 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 AC004467.1-201ENST00000615678 330 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 AC091932.3-201ENST00000624223 323 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 SMG1P4-204ENST00000523028 4131 ntBASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
RSPO4Q2I0M5 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 RNU6-1167P-201ENST00000363227 94 ntBASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 SNORA29-201ENST00000384183 140 ntBASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 RNU6-49P-201ENST00000384256 107 ntBASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 SNORA57.3-201ENST00000411095 141 ntBASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 RPL21P66-201ENST00000426566 466 ntBASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 AL158147.1-201ENST00000443970 75 ntBASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 RNA5SP497-201ENST00000516081 97 ntBASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 RNU1-95P-201ENST00000516357 160 ntBASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 RNU6-1061P-201ENST00000516530 99 ntBASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 RNU1-128P-201ENST00000516704 160 ntBASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 AL161798.1-201ENST00000604630 131 ntBASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 AL391903.3-201ENST00000612158 163 ntBASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 AL121890.5-201ENST00000620848 304 ntBASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO4Q2I0M5 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.18□□□□□ -1.74
RSPO4Q2I0M5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.18□□□□□ -1.74
RSPO4Q2I0M5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RSPO4Q2I0M5 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RSPO4Q2I0M5 Y_RNA.24-201ENST00000362508 103 ntBASIC4.18□□□□□ -1.74
RSPO4Q2I0M5 RNU6-801P-201ENST00000364087 105 ntBASIC4.18□□□□□ -1.74
RSPO4Q2I0M5 Y_RNA.293-201ENST00000364908 93 ntBASIC4.18□□□□□ -1.74
RSPO4Q2I0M5 RNU6-19P-201ENST00000384718 107 ntBASIC4.18□□□□□ -1.74
RSPO4Q2I0M5 MIR183-201ENST00000384958 110 ntBASIC4.18□□□□□ -1.74
RSPO4Q2I0M5 AL513331.1-201ENST00000411908 397 ntBASIC4.18□□□□□ -1.74
RSPO4Q2I0M5 AC138623.1-201ENST00000418060 216 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms