Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 Y_RNA.476-201ENST00000384347 108 ntBASIC0.44□□□□□ -2.34
HMGXB3Q12766 AC244505.3-201ENST00000454598 187 ntBASIC0.44□□□□□ -2.34
HMGXB3Q12766 RAP1BP2-201ENST00000478270 544 ntBASIC0.44□□□□□ -2.34
HMGXB3Q12766 AC145146.1-201ENST00000496370 254 ntBASIC0.44□□□□□ -2.34
HMGXB3Q12766 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.44□□□□□ -2.34
HMGXB3Q12766 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.44□□□□□ -2.34
HMGXB3Q12766 ROCK1P1-201ENST00000573767 549 ntBASIC0.44□□□□□ -2.34
HMGXB3Q12766 SNORA77B-201ENST00000578179 125 ntBASIC0.44□□□□□ -2.34
HMGXB3Q12766 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.44□□□□□ -2.34
HMGXB3Q12766 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.44□□□□□ -2.34
HMGXB3Q12766 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.44□□□□□ -2.34
HMGXB3Q12766 AL109620.1-201ENST00000618738 1197 ntBASIC0.44□□□□□ -2.34
HMGXB3Q12766 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.44□□□□□ -2.34
HMGXB3Q12766 MIR4275-201ENST00000636486 87 ntBASIC0.44□□□□□ -2.34
HMGXB3Q12766 RNU6-878P-201ENST00000384578 110 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 AC139712.2-201ENST00000424302 339 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGXB3Q12766 NANOGP2-201ENST00000435391 727 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGXB3Q12766 HMGN1P13-201ENST00000505795 138 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 SNORA31.17-201ENST00000516953 127 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGXB3Q12766 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.43□□□□□ -2.34
HMGXB3Q12766 MIR3937-201ENST00000580135 106 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 VN1R88P-201ENST00000596787 292 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGXB3Q12766 RNU6-778P-201ENST00000363269 103 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 SNORD118-201ENST00000363593 134 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 RNU6-673P-201ENST00000365084 104 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 SNORD14D-201ENST00000384390 87 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 SNORA48.1-201ENST00000390879 135 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 MIR1262-201ENST00000408276 93 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 PSMA6P3-201ENST00000428242 164 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGXB3Q12766 SNRPEP9-201ENST00000436794 238 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 MEMO1P3-201ENST00000459811 302 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 RPS27P22-201ENST00000478056 241 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 AC112206.3-201ENST00000514578 389 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.43□□□□□ -2.34
HMGXB3Q12766 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGXB3Q12766 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGXB3Q12766 AC112220.3-201ENST00000605502 502 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 AC239868.4-201ENST00000608318 671 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 AC013476.2-201ENST00000614456 459 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 AC240442.1-201ENST00000616055 283 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 AL138713.1-201ENST00000624026 2130 ntBASIC0.43□□□□□ -2.34
HMGXB3Q12766 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.42□□□□□ -2.34
HMGXB3Q12766 PPP1R11P2-201ENST00000423543 382 ntBASIC0.42□□□□□ -2.34
HMGXB3Q12766 SKA2P1-201ENST00000425592 390 ntBASIC0.42□□□□□ -2.34
HMGXB3Q12766 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.42□□□□□ -2.34
HMGXB3Q12766 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
HMGXB3Q12766 TRBVA-201ENST00000498804 316 ntBASIC0.42□□□□□ -2.34
HMGXB3Q12766 COPS8P3-201ENST00000526024 482 ntBASIC0.42□□□□□ -2.34
HMGXB3Q12766 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.42□□□□□ -2.34
HMGXB3Q12766 AL022345.2-201ENST00000606307 135 ntBASIC0.42□□□□□ -2.34
HMGXB3Q12766 AL159972.1-201ENST00000625150 448 ntBASIC0.42□□□□□ -2.34
HMGXB3Q12766 U2.21-201ENST00000637295 81 ntBASIC0.42□□□□□ -2.34
HMGXB3Q12766 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
HMGXB3Q12766 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.41□□□□□ -2.34
HMGXB3Q12766 SNORA25-201ENST00000384384 134 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 RPL22P22-201ENST00000395439 379 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 RN7SKP142-201ENST00000411236 328 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 RPL31P54-201ENST00000429803 370 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 MTCO3P5-201ENST00000433620 714 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 PTGES3P1-201ENST00000439531 483 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 RPS29P8-201ENST00000445109 171 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 AC067940.1-201ENST00000458411 300 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 AC112771.1-201ENST00000463581 102 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 AL163195.1-201ENST00000496941 348 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.41□□□□□ -2.34
HMGXB3Q12766 NRON-201ENST00000517270 370 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.41□□□□□ -2.34
HMGXB3Q12766 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.41□□□□□ -2.34
HMGXB3Q12766 CYP3A52P-201ENST00000563326 91 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.41□□□□□ -2.34
HMGXB3Q12766 MIR548AX-201ENST00000580117 73 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 BX284668.6-201ENST00000606899 438 ntBASIC0.41□□□□□ -2.34
HMGXB3Q12766 MIR525-201ENST00000384978 85 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 RSL24D1P8-201ENST00000434442 492 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.4□□□□□ -2.35
HMGXB3Q12766 MTCO3P17-201ENST00000443775 513 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 AC132479.1-201ENST00000449160 144 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 AC087477.1-201ENST00000465747 340 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 AL160314.1-201ENST00000490836 438 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 PTP4A1P4-201ENST00000512479 322 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.4□□□□□ -2.35
HMGXB3Q12766 ARL2BPP5-201ENST00000523141 481 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 AL590705.4-201ENST00000532209 134 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 AC079598.5-201ENST00000547460 117 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.4□□□□□ -2.35
HMGXB3Q12766 BNIP3P27-201ENST00000599991 412 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 VN1R82P-201ENST00000601481 356 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 NDUFA8P1-201ENST00000605525 367 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 AC027335.2-201ENST00000624030 375 ntBASIC0.4□□□□□ -2.35
HMGXB3Q12766 MIR302D-201ENST00000362275 68 ntBASIC0.39□□□□□ -2.35
HMGXB3Q12766 RNU6-611P-201ENST00000384276 104 ntBASIC0.39□□□□□ -2.35
HMGXB3Q12766 RNU6-564P-201ENST00000410983 104 ntBASIC0.39□□□□□ -2.35
HMGXB3Q12766 RPL26P27-201ENST00000414397 437 ntBASIC0.39□□□□□ -2.35
HMGXB3Q12766 AL353621.1-201ENST00000418219 243 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms